Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0204 ATGTCCAAGTTCTTCTTTGTTTTTGTTGCCCTCTTCCTCCCTGCTCTAGTCTCCGGCAAGCGGCAGTCATGTACATGTGATTCCGATGGCGCTGCCGCCGAGCTCAACGCTGCAAAAGAAGCAATCAAATACAAGGTGGGGTCGATTGCGTCTGTGCTGGTGGCCGGCGCTGCAGGGGTGAGCCTCCCTTTGGTGGGCAAGAAGATTCAGTCTCTGAGGCCAGAAAACGACATATTTTTCATGATCAAGGCTTTTGCTGCAGGGGTCATTTTGGGCACTGGGTTCATCCACATACTCCCCGATGCCTTCCAAGACTTGACCTCCCCGTGTATTGCCCAAACCCCTTGGGGCGATTTCCCTTTTGCGGGCTTCATTGCGATGGCCGCCTCCATCGCCACCTTGATGTTGGACACATTTGCAACCAGTTTTTACCAGAGACGCCACTTCAGTAAAACCAAGCAGGTAACTGCAGATCAGGAAAGAGGAGACGACCATGCCGGTCACGTGCATGTTCACACGCACGCCACACATGGCCACGCTCACGGATCCGCCGCCGCTCCCACCGGAGACTTGAGTCTCGCTGACTTGATCCGCTACCGGATTATATCTCAGGTGTTGGAGTTGGGAATTGTGGTTCATTCGGTAATAATTGGTATTTCTCTTGGTGCCTCACAGAGCCCTGCCACGATTAAGCCACTACTTGTTGCTCTGTCCTTCCACCAATTTTTCGAGGGCATGGGTCTCGGTGGCTGCATTTCCCAGGCACAATTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCACCTGTGGGAATTGGAGTGGGAATTGGAATCTCCGGAGTTTACAAAGACAACAGCCGGACGGCTCTGATCGTGGAAGGAAGCATGAACTCAGCATCGGCAGGAATATTGATATACATGGCGCTTGTTGACCTTCTTGCAGCAGATTTCATGAACCCAAGGATGCAAAACAATTTGGGGCTTCAATTAGGGGCTAACATCTCTTTGCTTCTAGGAGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1068 51.87 MSKFFFVFVALFLPALVSGKRQSCTCDSDGAAAELNAAKEAIKYKVGSIASVLVAGAAGVSLPLVGKKIQSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIAQTPWGDFPFAGFIAMAASIATLMLDTFATSFYQRRHFSKTKQVTADQERGDDHAGHVHVHTHATHGHAHGSAAAPTGDLSLADLIRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIGVGIGISGVYKDNSRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1426646 1428929 - CrPI670011_01g002040.1 Cre01g0204 487749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0204 355 Pfam ZIP Zinc transporter 43 352 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cre01g0204 355 PANTHER ZINC/IRON TRANSPORTER 41 354 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cre01g0204 355 NCBIfam ZIP zinc/iron transport family 27 355 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0204 Cre-Chr1:1426646 Cre11g2094 Cre-Chr11:32727640 8.60E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0204 K14709 - csv:101216720 545.043