Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0220 ATGGTGTTTCGAGGGCCTGACGCCACCTCCATCGAACAGCTCGCGCCGCCAGCCACTCCGACCTCCTGCCCGCCGTCGTTATCTCCGGCCATCCCTCGCGCCGCCGCCGGAATTAAAAACGAGGTTAATCCCTCACCACTCCAAGGAGACTTTCATTCTGCCTTGGCTATGAGGAAGAAACGTAATAACGAGAAACAAAAGGTAATTCTACCGCCGGACCTTCCGCCAGAGGTTACTGAGGAAGAAATTGAGGTCTCCGATGAGGACTTGGAGTTTGTTAAGGAGAATCAAGACTATGCCGTGTCTGTTTCCCGTCTAGACACTAAATCCATAACCAAGCATGTTACCCGGGTCGCTAATGTTGAAGAAGATGCTTTGGAGGTTTTATACGAGAAGCGTCTGCGCAAGAAGCCAGTGGAGAATCAGGAGGAGGAAAATAAGCTCCAAGTTGATCGTGTGGATGCTCTTCCTGTCAAAACACTTGATGGGAAACTCTACTACCGGACATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAAGAGGCAACGGAAGAGGACCAGGTAGATAATGGTGTAATGAAGTTAAATAAAGCAGAAAGGAGGGCAAAGCAAAAGAAAATTAAGAAGATTGCCAAGAAACAAGAGGATGTAACCCAAGCTGAAGAAGTTCAACCAACCCCACAAGCTGCAGTTTTGGCTGAAGTGGCAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTGGCAGACCCAAACTCCAATATTAAATCTTTGAAGGAAATGCTGCAGATTGCTAAAGATAATGATCAAGCAATAGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTGGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGGTACTATGAGTCTACTCTTCTTACTATTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCGTCATTTCAGCATGTTGTTATTCGCTGTATATGTGCATTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGTTAGGTATCGTTGTTAAAAACATAAGCTCCCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCGACTGTGGAGGCCGTTCGGTTAATTGCTGATCATGTGAAATATCACGATTGCCAATTGCATCCTGATTCCATCCAGTCTTTTCTACATCTAACATTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGACGAGCACAGTAAAGTAAAGAACAAAAAACACAGGAAAATAAAGAATCGTGAGGAATCAAGTCATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACGAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTGTTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAACTGCTAGGCCTGAAGCAAGTAGTGCTCCGTCCACTACTAGTCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATTGATTTAGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGTGACGATTCTTCTGAGAAACAGTCACAATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTCTTTGTCCAGCTATACAATATTCTACTTGAGTACAGACCTGGGAGAGATGAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCAGAAAAATGTCAAGTGCCGCAACCTCTTGGAAAACGATGCTGGTGGAGGTTCAGTATCTGGCTCTATTGCGAAATATCAGCCATATGCCTCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTAGCATATCAAGCATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTTGAACAGGAGTCTTTTAATCCACAATTTAATGCCCGAAAAGTTTACAAGAGGAAAAGAGCTACTGAATCTTCCCAGTCTACTCTGGATACGTACGGCACTATCGACGAAAATGAAGTGAAGGAGAAACTCTCAACAAGATTCTTTCTTCTCCGGGATATCAAGGACAATGAAAGGACGCGACCGGCCGTCGATACCTCCGATCTCGTCGGATCTCTACAGACGCCGCCAGCCGAATCATCAGGTAACTTCTTGCTTCTATTTCCGATGATAGTGCCGCTGATTAATCAAGAAGAATCCCTAATCCTCCGGCGGATTACCGGAGACTGGATTACCTTCTCCCGTAATTTTAGCGAATTATTACTTCTTTCGCTACTTTCTTTCCCTTTGTTTGATTGTTATTGCCATAAATGGGGGAATAAGATCTTGGATGTTCCCGATTTTGGCGAATCGAGAATATTAAAGAATCCAGAAGAGGCAACGAGAACTGAAAATCTGTGGGAACAATTTACGTTTCCTATTCGTTAG 2907 43.07 MVFRGPDATSIEQLAPPATPTSCPPSLSPAIPRAAAGIKNEVNPSPLQGDFHSALAMRKKRNNEKQKVILPPDLPPEVTEEEIEVSDEDLEFVKENQDYAVSVSRLDTKSITKHVTRVANVEEDALEVLYEKRLRKKPVENQEEENKLQVDRVDALPVKTLDGKLYYRTSKLSDAPENGGNEEATEEDQVDNGVMKLNKAERRAKQKKIKKIAKKQEDVTQAEEVQPTPQAAVLAEVAEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTIYKGYLQKLMSLEKLPSFQHVVIRCICALLDAVPHFNFRETLLGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQSFLHLTFDEDLRKAEKQDEHSKVKNKKHRKIKNREESSHLQGNDGRQSMRTKFTEEVAADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTARPEASSAPSTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDDSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNILLEYRPGRDEGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLQKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELNLLWKHYHPAVSTMAASISSMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNARKVYKRKRATESSQSTLDTYGTIDENEVKEKLSTRFFLLRDIKDNERTRPAVDTSDLVGSLQTPPAESSGNFLLLFPMIVPLINQEESLILRRITGDWITFSRNFSELLLLSLLSFPLFDCYCHKWGNKILDVPDFGESRILKNPEEATRTENLWEQFTFPIR 968
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1560999 1579968 + CrPI670011_01g002200.1 Cre01g0220 487765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0220 968 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 54 818 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Cre01g0220 968 SUPERFAMILY ARM repeat 271 648 IPR016024 -
Cre01g0220 968 MobiDBLite consensus disorder prediction 1 31 - -
Cre01g0220 968 MobiDBLite consensus disorder prediction 453 487 - -
Cre01g0220 968 Pfam CBF/Mak21 family 610 765 IPR005612 -
Cre01g0220 968 Pfam Nucleolar complex-associated protein 250 340 IPR011501 -
Cre01g0220 968 Coils Coil 197 225 - -
Cre01g0220 968 MobiDBLite consensus disorder prediction 171 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0220 K14834 - csv:101213821 1390.17