Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre01g0379 | ATGCCTGAGAAAGAGAGCCACAATGTTGTTACAGAGCCTCGTTTGGTAGCTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTCGACCCTTTTCTAGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACAGTGACATACATGCTGCAGGGAAGTGTGACACATGAAGATTTTGAAGGGCACAAGGGAACAATAGGAGTAGGTGACTTGCAATGGATGACTGCAGGTAGAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGTACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGGAATTCCAGAAGCTTCAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCTGATCCCGTCGTCATGGAACGCATTCGTGTACATTCTTGAAGGAGAAGGCGTCTTTGGCAGCTCAAAGGCGACATCAACAACAGCACATAACCTACTTCTTCTCGGTTTCGGGGACGGTTTAGAGGTTTGGAATAAGTCAGCCAAGCCTCTTAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGATTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGGAATTTCTCTTGGGTTCTAA | 906 | 44.81 | MPEKESHNVVTEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGVGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKGIPEASKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQLIPSSWNAFVYILEGEGVFGSSKATSTTAHNLLLLGFGDGLEVWNKSAKPLRFILVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAGISLGF | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3170587 | 3173971 | - | CrPI670011_01g003790.1 | Cre01g0379 | 487924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre01g0379 | 301 | PIRSF | Pirin | 12 | 292 | IPR012093 | - | |
Cre01g0379 | 301 | FunFam | pirin | 27 | 163 | - | - | |
Cre01g0379 | 301 | PANTHER | PIRIN-RELATED | 7 | 294 | IPR012093 | - | |
Cre01g0379 | 301 | Gene3D | Jelly Rolls | 148 | 253 | IPR014710 | - | |
Cre01g0379 | 301 | CDD | cupin_pirin_N | 33 | 128 | - | - | |
Cre01g0379 | 301 | SUPERFAMILY | RmlC-like cupins | 14 | 293 | IPR011051 | - | |
Cre01g0379 | 301 | CDD | cupin_pirin_C | 176 | 252 | - | - | |
Cre01g0379 | 301 | Gene3D | Jelly Rolls | 27 | 279 | IPR014710 | - | |
Cre01g0379 | 301 | Pfam | Pirin | 33 | 126 | IPR003829 | - | |
Cre01g0379 | 301 | Pfam | Pirin C-terminal cupin domain | 179 | 283 | IPR008778 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0379 | Cre-Chr1:3170587 | Cre10g0693 | Cre-Chr10:6607628 | 3.70E-133 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre01g0379 | K06911 | - | csv:101216351 | 591.652 |