Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0380 ATGGTATCGGAAAAGGAAGACTATCTTGATGTTGTTAAAAAAGCATTGGGAGAGCTTTCTTCCTCCGATCAACAGCTGTGGATTTGCCGGAGGAGGCGCCCTGAAGTTCGCCTGAGCTCCGATGAGTTGCTGGAAGAGTTTTCCGGCAATGTGTTCTCTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTCCCTGGTGCTGGAAATGCTCCATTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCATGTGGAGTTGCCTACAATTTTGCAGTTATGGTCAGTGTTCCTGACGTGATCTTATGGTGCGATGTGCAATTAACCAAAGATGGAGTTGGAATTTGTCTTCCGGATCTGAGGCTTGACAATGCTACTGATGCTCCGACTATTCTAGGGACAAACCGCAGCAATGTCTATCTTGTTAATGGTGTCCGTACTAAGGGATTGTTTACGGTCGATTTCAATTTCAAAGAACTGGAAAATGTTTCTCTTGTTCAAGGTATCTATTCTCGAACTAATAAGTTCGATGGCAATGAGTTTGTTATTCTCACTCCTGAAGATGTGGTTAATCAGTTCAAGCCTCCAGGATTTTGGCTAAATATTCAGCATGATGTGTTCTTCACGCAACATAACGTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGAAGCATCATTGTTAACTATATATCATCACCAGAGGTCGGATTTCTCAGAAGTATAGCTGCAAGGGTTCCCCGCACAACAAAGTTGATCCTTCGGGTCTTAGGACCCACTGATACTGAGGTTACCACCAACCAGACATATGCCTCTCTCTTAGGAAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATATGGCCCATTAGTAACGATGGTTACATACAACCTCAAACCTCTCTTGTTTCTGATGCTCACAAAGCACAGCTGGAAATTTTTGCATCAGACTTCTTTAGTGATCTTCCATTAAGCTACAATTACAGTTACGATCCCGTTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATTTCTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGATAAGAACGCCAAAAGTCAAGCCAAGCCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGCTTGCACAGATTTGGCATACTCGAATGCCATTTCAGATGGTGTTGAAGTACTTGACTGTCCTGTTCAAATAACAAAAGACGGGATACCATTTTGCATGAGCTCAATTAATCTCATCGACAGCACAACAATATCTCAATCACCATTCATTAACCGTTCAAAAAAAATTCCCGAAATTAGTCCTAACGAAGGAATTTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTAACCCCGTCAATATTGAACCCTTATTCGAAGTTCACGTTGTTCCGAAATCCAAGGTTCAGAAACAGTGGAAAATTCATGACACTACTTGATTTCTTGGCCTTCGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCATATTGAGCATGCGGCCTACCTTGCTAAGGGTCAGGGTTTAAGTGTAACTGATGCGGTCTTTGGTTCCTTAAGCAAAGCTGGTTATGATAATCAGACAGCCCTTAAAGTATTGATTCAATCTCCAGATAGTGCTGTTCTAAAAAAATTTAAACAGGAAAATAACAGTTACGAGCTTGTTTATCAAGTTGACATGTCAATTGGGGATGTGCTCAATACAACTGTTGTGGACATAAAGAGTTTTGCCAACTCTGTGACTATCAGCAAGCCCTCTGTCTTCCCTGAAAATCAGCTATTTCTCACGGGATCTACAGATGTTGTGAAGAAGCTGCAAGCACTTAAGCTCTCTGTATATGTGGAAACCTTCGACAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCCGATGCAACTGTAGAGATCAACTCATATGTTTTGGGAGCCAACATTGATGGAGTCATCACCAGCTTCCCAAAGACATCTGCTAGATATAAAAAGAACCGATGTTTAACAATGAAAGAAACACCTAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGTTGCAACTTGTTACTCCAGACTACCTGCCTCCGAAGACAGCTCCGAGCCCGGTTTTGAATGACAAAGACGTAGCCGAGCCACCATTGCCTCCGGTTTCGGCCAAAGCCCCAGCACCTGCTGTGGACAGTGGCCCTACAGCAGCATCTCCAACTTCTAAACCCAATGGACAACCTAAGCTTGGAGCTGGAGCAGGCTTCTTGTTCTTGAACCTTGCCATACTTTCCATTGCTCTTCTTCCATTCTGA 2379 42.58 MVSEKEDYLDVVKKALGELSSSDQQLWICRRRRPEVRLSSDELLEEFSGNVFSPSSVSSVSSLVPGAGNAPFVVARGGFSGLFPDSCGVAYNFAVMVSVPDVILWCDVQLTKDGVGICLPDLRLDNATDAPTILGTNRSNVYLVNGVRTKGLFTVDFNFKELENVSLVQGIYSRTNKFDGNEFVILTPEDVVNQFKPPGFWLNIQHDVFFTQHNVSMRNFVLSVSRSIIVNYISSPEVGFLRSIAARVPRTTKLILRVLGPTDTEVTTNQTYASLLGNLTFIKTFASGILVPKTYIWPISNDGYIQPQTSLVSDAHKAQLEIFASDFFSDLPLSYNYSYDPVTEYLSYFDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPACTDLAYSNAISDGVEVLDCPVQITKDGIPFCMSSINLIDSTTISQSPFINRSKKIPEISPNEGIFAFDLTWEEIQGLTPSILNPYSKFTLFRNPRFRNSGKFMTLLDFLAFAKNASTLSGVLIHIEHAAYLAKGQGLSVTDAVFGSLSKAGYDNQTALKVLIQSPDSAVLKKFKQENNSYELVYQVDMSIGDVLNTTVVDIKSFANSVTISKPSVFPENQLFLTGSTDVVKKLQALKLSVYVETFDNEFVSQAWDFFSDATVEINSYVLGANIDGVITSFPKTSARYKKNRCLTMKETPNYMSPVQPGSLLQLVTPDYLPPKTAPSPVLNDKDVAEPPLPPVSAKAPAPAVDSGPTAASPTSKPNGQPKLGAGAGFLFLNLAILSIALLPF 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3181301 3192218 - CrPI670011_01g003800.1 Cre01g0380 487925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0380 792 ProSiteProfiles GP-PDE domain profile. 387 689 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 69 370 - -
Cre01g0380 792 CDD GDPD_SHV3_repeat_1 71 370 - -
Cre01g0380 792 ProSiteProfiles GP-PDE domain profile. 71 371 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 385 689 - -
Cre01g0380 792 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 68 753 - GO:0008889(PANTHER)
Cre01g0380 792 MobiDBLite consensus disorder prediction 726 767 - -
Cre01g0380 792 SUPERFAMILY PLC-like phosphodiesterases 386 688 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 Pfam Glycerophosphoryl diester phosphodiesterase family 106 324 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 Pfam Glycerophosphoryl diester phosphodiesterase family 394 683 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 Gene3D Phosphatidylinositol (PI) phosphodiesterase 69 367 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 Gene3D Phosphatidylinositol (PI) phosphodiesterase 385 688 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cre01g0380 792 CDD GDPD_SHV3_repeat_2 387 688 - -
Cre01g0380 792 SUPERFAMILY PLC-like phosphodiesterases 70 365 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0380 Cre-Chr1:3181301 Cre04g1547 Cre-Chr4:34081366 1.00E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0380 - - - 0.0