Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre01g0429 | ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCAGCTCAGGCTGCGGCGGAGGTCGTTCGGCTCACTACCATCCCTCGGTACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACATCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGGTCCCGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCGGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGCCTCGCCGGCGAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGATCAAGAATGTTGCAGAGAGAGATTTTACCGGCGAGAGCAGATAG | 1458 | 50.89 | MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPANSRRHSGPPKIDASPIKNVAERDFTGESR | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3658142 | 3661425 | + | CrPI670011_01g004290.1 | Cre01g0429 | 487974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre01g0429 | 485 | MobiDBLite | consensus disorder prediction | 324 | 351 | - | - | |
Cre01g0429 | 485 | MobiDBLite | consensus disorder prediction | 395 | 411 | - | - | |
Cre01g0429 | 485 | Coils | Coil | 177 | 197 | - | - | |
Cre01g0429 | 485 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 438 | - | - | |
Cre01g0429 | 485 | SMART | iq_5 | 113 | 135 | IPR000048 | GO:0005515(InterPro) | |
Cre01g0429 | 485 | ProSiteProfiles | IQ motif profile. | 114 | 142 | - | - | |
Cre01g0429 | 485 | Gene3D | iswi atpase | 111 | 149 | - | - | |
Cre01g0429 | 485 | MobiDBLite | consensus disorder prediction | 377 | 394 | - | - | |
Cre01g0429 | 485 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Cre01g0429 | 485 | MobiDBLite | consensus disorder prediction | 320 | 485 | - | - | |
Cre01g0429 | 485 | Pfam | IQ calmodulin-binding motif | 117 | 135 | IPR000048 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0429 | Cre-Chr1:3658142 | Cre04g0976 | Cre-Chr4:28377469 | 1.80E-108 | dispersed | |
Cre02g0579 | Cre-Chr2:2840803 | Cre01g0429 | Cre-Chr1:3658142 | 1.30E-13 | transposed | |
Cre04g1962 | Cre-Chr4:37087747 | Cre01g0429 | Cre-Chr1:3658142 | 1.60E-33 | transposed | |
Cre05g0080 | Cre-Chr5:1008893 | Cre01g0429 | Cre-Chr1:3658142 | 8.10E-31 | transposed | |
Cre06g1039 | Cre-Chr6:4109017 | Cre01g0429 | Cre-Chr1:3658142 | 8.10E-30 | transposed | |
Cre09g1774 | Cre-Chr9:36133532 | Cre01g0429 | Cre-Chr1:3658142 | 8.50E-28 | transposed | |
Cre10g1700 | Cre-Chr10:31200951 | Cre01g0429 | Cre-Chr1:3658142 | 2.40E-20 | transposed | |
Cre01g0429 | Cre-Chr1:3658142 | Cre10g2162 | Cre-Chr10:36146258 | 2.00E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre01g0429 | - | - | - | 0.0 |