Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0470 ATGGAATTTGCCGACGAGCTCACGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACTAGAGACAGCGGCGAGCTCTCATCTTCCGACAACGACACCGAAGATGTACATCCTGTTTTTTCTAACATGCCCGCTTCACTTGCACCACCAGTGTTTCCCACTCTTCCTCTGCAAAGTAAAAGTAACGTAGCAATTCAGGCTGATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGGATTATCAATGACCGTGATTCAAGGGTGACAAGAAATGATGTGATCAGTGCTATGTGTTTTTACATCAACAGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAAGATGTCATATAAAGACTTGGATGACCAGCAAATGCAACAGCTATTGAGATTGAAAGAGCTCCTATGTGGGATTGTAGATGGAGCTAAAGACGTGGAAACTGAACCTTCCCATATTGTTGAACAGGGCATGGTTAGTGATATGTGGACGACTGAGAGTTTGGAGGTTGAGCCACTTGATTCCTGCAATGATGATGTACCACTTGGAGAGACACAAATTGTAATGGTTGAAGATGAACAGGCAGTAGCTGAAGCTAGGCTTGAGAATCAATATTGTGACCCACATGTTAAACACTCTGTCAGTTGGCCAAAAAATGGTAGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACTCTCGAGCTGTCTTCAAGAAACTACTCACCTACAGAGTTTCAACTTATCATGCCAGTTTCTGTGGTAGATTCAATACTTGATGTAGCTGCGAGTATCCTTCACAAGGAACCAAATTGCGTGGAAGTTGACTGCCATGGAGAAGTTTCAAAAGTGGTTATAGTTGGGGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTGCCATCTAAAAGCCAGTATTTCGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTTGAGGTGTTTTTGGTCTTATTGGCATGGAAGATCTTGATGCCTGATAGAGTATATATGCTCCGTGGAAATCATGAAACCAGAATTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACGTTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACACATGGAGGGTTATTTCGTAAACCATGCAATCCTGATGTGCAGAATGACAAGGAAAGGAAAACGCAGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTTATTGACATTCCAACTGAAGATGAAGATCCAAATATAGTTTTGGCAGATGTATTGTGGTCGGATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGCGGGTCTACTGTGGGGTCCTGATTCTACTGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGGTCACATGAAGGCCCAGATTCAAGGGACGGTAAGATTGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTATAATAATGAGGGAGCATATGCTACTTTGAAGCATCCAGATTTTGAAACTCCATCTTTCCATACATTTAAAGCTGTAGATAAACCGAAGATAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTAGATTTAGATTTGACATTAATGGCTCTAGCTGATGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATACTACAGGTACCCAAAATGTTCAGATTCCGAAGGCTCCCATGGTAGAAGGGCTGCCTTTGCCGCCTAGCATAGAGGAACCTCATAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGACTGAAATTTATGCTCCAGACAACGGAAAATAAGAACAAGATTCATATTTCTCATCGGAAGAGGAAGAAATGCAATTAG 2229 40.83 MEFADELTAGATASNSNRHKPSDTRDSGELSSSDNDTEDVHPVFSNMPASLAPPVFPTLPLQSKSNVAIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIINDRDSRVTRNDVISAMCFYINRLAGKCKDIVDILNKMSYKDLDDQQMQQLLRLKELLCGIVDGAKDVETEPSHIVEQGMVSDMWTTESLEVEPLDSCNDDVPLGETQIVMVEDEQAVAEARLENQYCDPHVKHSVSWPKNGSLTLEWVVEMMKTLELSSRNYSPTEFQLIMPVSVVDSILDVAASILHKEPNCVEVDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYFVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYMLRGNHETRICTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKERKTQKLEIGSLQDLSKLERFFIDIPTEDEDPNIVLADVLWSDPSKVDGLRENQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKHPDFETPSFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDTTGTQNVQIPKAPMVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENKNKIHISHRKRKKCN 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4062642 4070478 - CrPI670011_01g004700.1 Cre01g0470 488015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0470 742 Pfam Calcineurin-like phosphoesterase 322 541 IPR004843 GO:0016787(InterPro)
Cre01g0470 742 Gene3D - 221 625 IPR029052 -
Cre01g0470 742 ProSitePatterns Serine/threonine specific protein phosphatases signature. 386 391 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 SMART pp2a_7 289 613 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 80 620 IPR051134 -
Cre01g0470 742 MobiDBLite consensus disorder prediction 1 46 - -
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 352 379 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 569 585 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 422 448 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 322 349 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 385 409 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 PRINTS Serine/threonine phosphatase family signature 475 502 IPR006186 GO:0016787(InterPro)
Cre01g0470 742 MobiDBLite consensus disorder prediction 19 36 - -
Cre01g0470 742 SUPERFAMILY Metallo-dependent phosphatases 277 617 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0470 Cre-Chr1:4062642 Cre10g0272 Cre-Chr10:1625814 5.60E-114 dispersed
Cre01g0465 Cre-Chr1:4006822 Cre01g0470 Cre-Chr1:4062642 5.70E-08 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0470 K04460 - csv:101211172 1414.05