Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0575 ATGAAGGGAAGGGTAGATGGTGGAAGTGAAAGAGAGAGAGGGGAAGGAAGGCTTCAGGAAGATATGGCGGTAAGTGGAAGAAGTATGATGGAAGGAGTTCTCCCATTTCCGGCGATGATAGCGATGGAGTGTATCAACGTCGGTCTCAACACTCTTTTCAAAGCCGCCACCGCCGCCGGCATGAGCCACCACGTGTTCGTCGTCTATTCTTACTCTTTCGCCGCCCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCCACTCGTCTTCCACCTCTCACTTTCTCTCTACTTTCGAAGATCGCTCTTCTCGGATTCATCGGTTCTTCTTCGCAGATTATGGGATACACGGGAATCAATTACAGCTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTGGCCATCATCTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCCAAAGTGATGGGCACAATAATATCAATAATAGGTGCATTTGTGGTCACATTTTACAAAGGTCCAAGGATCATGTTCTCTTCAGAGCCCATTTCTCTTTCACTTCATCACCATCCACAACTATCTTCTTCAGATTCTGATTGGGTCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCATCATAGCTGCAGTTGTAGGTGTGATTTTTGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTATTTGGATCATGTTTAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCAATGTTTAAGCCGTTATCCATCGTTGTCGCTATCGTAATGGGAGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTCATTGGAGCATCCATAATATCCATAGGGTTTTACACTGTAATGTGGGGAAAATCAAAAGAAGAAATGGGTGTTGGAGAAGAAAAAGAAGAAGGCCATAGCCATAATCTTGATGGTAACAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACACACAGAGATACAGTGCAGACCATGTATGA 1194 44.05 MKGRVDGGSERERGEGRLQEDMAVSGRSMMEGVLPFPAMIAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLTFSLLSKIALLGFIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISIIGAFVVTFYKGPRIMFSSEPISLSLHHHPQLSSSDSDWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAIIAAVVGVIFETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKSKEEMGVGEEKEEGHSHNLDGNKESNEDQRVPLLGSYNTQRYSADHV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5051651 5056916 + CrPI670011_01g005750.1 Cre01g0575 488120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0575 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 352 - -
Cre01g0575 397 MobiDBLite consensus disorder prediction 355 377 - -
Cre01g0575 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 179 - -
Cre01g0575 397 PANTHER WAT1-RELATED PROTEIN 38 363 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre01g0575 397 MobiDBLite consensus disorder prediction 355 381 - -
Cre01g0575 397 Pfam EamA-like transporter family 223 347 IPR000620 GO:0016020(InterPro)
Cre01g0575 397 Pfam EamA-like transporter family 47 176 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0575 Cre-Chr1:5051651 Cre10g1586 Cre-Chr10:29908025 2.00E-78 dispersed
Cre01g0574 Cre-Chr1:5034716 Cre01g0575 Cre-Chr1:5051651 3.90E-69 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0575 - - - 0.0