Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0576 ATGGCTATGGCTATGGCTATGGCTATGGCTATGGCTATGGCTATGGCCAAGGATGGGAGGAGATTGTACAATTTGTTTGTGCGGGCCGGCCGATGCCCCTTCTCTCTCCCGCTGTCTTCCTCGTTTCGATCCACTCGGAGGACACCTAGTCAGGAACCCATGCCTTTGTCCTTATCGTCAATTGGCAGCCTGCCCAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA 501 49.9 MAMAMAMAMAMAMAMAKDGRRLYNLFVRAGRCPFSLPLSSSFRSTRRTPSQEPMPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5056967 5059472 + CrPI670011_01g005760.1 Cre01g0576 488121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0576 166 SUPERFAMILY LigT-like 51 138 IPR009097 -
Cre01g0576 166 Pfam 2'-5' RNA ligase superfamily 50 147 - -
Cre01g0576 166 Gene3D Cyclic phosphodiesterase 39 161 - -
Cre01g0576 166 PANTHER - 49 165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0576 - - - 0.0