Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0581 ATGGTGAAAGTAAACTCTTCCTTTACAATGACATGTTTTTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCTGACTACCTCACACTCCGCAAAGGCTTCATCATGAATCACCACCTCCCCTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTAGGTGTGAGTGGTCCACTATGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCAATTGCTCTTGTTCTGTTGGTGGGCACGAAGCTGCAGCATGTCATTGCAACGTTAGCATTGGAAAGTGCTGGTATAACTGGTTCATTTTCGGGTTCAAAGCTAAAGCCAAGAGATGATCTTTTTTGGTTTAAGAAGCCAGAGCTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAACGCATTCGAGTTGGCATCATTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTCATTAGGAATCATATGCTTGTCTATGCAAGACTTATTTTGGGATTCGCTGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTATATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATTCATGGATGGGGGAAGGCAGCAAGGAGGAAAAGAAGGCTTCGCATGTTTGCAGATGACACCACAATTCACACCGAAACAAGCACTGTGATGTCACTTGAGGATGATGACCGTCGGCTTATCGATGATACTTCTGAAACTACTGCTGACTATACGGCAATCGAACTACAGACGACTTCCGTACAAGATGAACCTGACTCTGTTACTAATGAACGGCCAAGCAGGGCTAGAATGCCTCTTCTACAACCCTCTACATCTCTTTCTTCTGCAGTTGATCATAAGTTTGAGGTGGAAAACTTTATGAGAAGCTTTTCTATGCCAGTCAAAAGATAG 1002 42.81 MVKVNSSFTMTCFFRQFGNSVVRADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPIALVLLVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFADDTTIHTETSTVMSLEDDDRRLIDDTSETTADYTAIELQTTSVQDEPDSVTNERPSRARMPLLQPSTSLSSAVDHKFEVENFMRSFSMPVKR 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5087952 5091650 - CrPI670011_01g005810.1 Cre01g0581 488126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0581 333 Pfam Mlo family 7 248 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre01g0581 333 PANTHER MLO-LIKE PROTEIN 1 6 279 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0581 Cre-Chr1:5087952 Cre05g1133 Cre-Chr5:10792689 1.30E-70 dispersed
Cre11g2216 Cre-Chr11:33868779 Cre01g0581 Cre-Chr1:5087952 1.80E-136 transposed
Cre01g0581 Cre-Chr1:5087952 Cre08g0871 Cre-Chr8:21835728 1.00E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0581 K08472 - csv:101217434 639.802