Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0584 ATGGAGTTTCTCTTCTTCCTCCTCCTTTCCCTCTTCTCTCATTCCGCCTCCGCCGCTCTCTCCGCCGACTACTACCGGAATTCCTGCCCTGCATTTTCTCAGATCATCCGCGACACTGTCACCAACAAGCAAATCACCACCCCTACCACCGCCGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGACGCCTCCATCCTCATCTCCTCCACCCCCTTCAACGTCGCCGAGCGCAACGCCGACATCAACCTCTCCCTTCCCGGCGACGCCTTCGACGTTGTCGTCCGTGCTAAAACCGCCCTCGAACTCTCTTGCCCCAACACCGTCTCCTGCGCCGACATCCTCACTGCCGCCACTCGCGACCTCCTCACCATGGTTGGCGGCCCTTACTACACCGTCTTCCTCGGCCGCAAAGACGCCAACGTTTCCAAAGCCTCCGCTATTGAAGGTTCTCTCCCTAGACCCACCATGTCCGTCTCTGAGATCATCAGAATTTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTAGCGTTAAGCGGCGCTCATTCAATTGGCTTCTCGCATTGTAAGGAGTTCGCCTCTGAGATCTTCAATTACAGCAAATCCCCGCCCAACGACAGCCATTACAACCCTCGATTCGCATTAGGGTTACAGCGAGCTTGCGCCGATTACCAGAAGAATCCAACTCTATCGGTTTTTAACGACATTATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAAGGGGTTAGGGCTTTTGAAGTCCGATGGCGGATTGTACAGCGATCCAAGAACGAGGCCGTGGGTGGAGAAATATGCTGCCGATGAGAGCGTGTTCTTCGGGGCGTTTTCTCAAGCGATGGTGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGCCTTCAATTGA 966 54.66 MEFLFFLLLSLFSHSASAALSADYYRNSCPAFSQIIRDTVTNKQITTPTTAAATLRLFFHDCLPNGCDASILISSTPFNVAERNADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILTAATRDLLTMVGGPYYTVFLGRKDANVSKASAIEGSLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFASEIFNYSKSPPNDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGLLKSDGGLYSDPRTRPWVEKYAADESVFFGAFSQAMVKLGGYGVKVGNEGEIRRRCDAFN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5127620 5128585 + CrPI670011_01g005840.1 Cre01g0584 488129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0584 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 Gene3D Peroxidase, domain 2 158 300 - -
Cre01g0584 321 FunFam Peroxidase 158 300 - -
Cre01g0584 321 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601(InterPro)
Cre01g0584 321 Pfam Peroxidase 37 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cre01g0584 321 Gene3D - 23 321 - -
Cre01g0584 321 FunFam Peroxidase 23 167 - -
Cre01g0584 321 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 PANTHER - 4 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre01g0584 321 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0584 Cre-Chr1:5127620 Cre02g1532 Cre-Chr2:27657129 4.30E-79 dispersed
Cre01g0584 Cre-Chr1:5127620 Cre01g1290 Cre-Chr1:26128940 1.60E-105 wgd
Cre01g0584 Cre-Chr1:5127620 Cre10g1596 Cre-Chr10:30072817 2.00E-132 wgd
Cre01g0584 Cre-Chr1:5127620 Cre06g2540 Cre-Chr6:33040600 4.70E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0584 K00430 - csv:105435603 552.747