Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0729 ATGGCTACTTCCTCCTATGTCTTTCCAATGTCAAGTCATCTCCTTTTCCTTCTCCTTCTTCTTTCCTTTCTTCCTCCCTCCATTCACTCAATTTCTTTCCAAATAGATCGGTTCAAGACCAATGAAAGTGATGCACTTTACCAAGGAGATGCCCTTCCTTCAGTTGGATCAGTTGAATTCAACAATGTTAATTATCTTTGTAGAGTTGGTTGGATTATCTACAAGGACATTGTGCCAATTTGGGACTCTAAAACAGGAAAAACCACTGATTTTACAACCCACTTCACCTTCTTAATAGATACCCAAAATGTTCAAAACTATGGCCATGGAATAGCTTTCTTTCTAGCTCCAATTGGGTTCCAAATCCCTCCAAACTCAGCTGGTGGCTTTCTTGGCCTTTTCAACACCACAAATAGTGATTCAACCATCAACCAAATTGTTCATGTTGAATTTGATTCTTTCTCCAATCAAGAATGGGATCCTCCATATGAACATGTGGGCATAAATGTTAACTCCATTGCTTCTTCTAATTACACTCGTTGGAATGCTAGTTTACATAGTGGAGATATTGCTGATGTGTGGATCTCCTATAATTCAACTACAAAAAACTTGAGTGTTTGGTGGAAATACCAAAGTGGGTCAAATTCTTCTGAGAATACAACTCTAAGTTACCAAATTGATCTCATGAAGGTTCTTCCTCAATGGGCGACAATAGGATTTTCAGCTGCAACTGGAATGTATGTAGAGAGACATACATTATTTTCATGGGAATTCAACTCCACCTTGGATATAAACAAAGCAAGTGAAGATAATGGGAATAAAGTTAATGTAATTGTGGGTGTGACTGTTTCAATAGGAGTTTCAATTCTCATAGCAATTATAGCCTTTGTAGTACTTTGGAGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTTATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTCATAAGCTACTTGCCATGGCTACCAACAACTTCTCCAATGAAAGGAAGCTTGGTCAAGGAGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTCCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATATCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCACTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTGGATTCAAACTTCAATGTCAAGCTTGGGGATTTTGGGTTAGCTAGATTAATGGACCATGAGTTGGGAGCTCAAACAACTGGGTTGGTTGGAACTTTGGGCTACTTAGCTCCTGAATATATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACTGGAAGAATGTCAAGAACCTCCATGGAAACAGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGATTGATGGCATGGATGAGAAATTGATGAAGTCTGATTATGACCAAAAACAAATAGAGTGTTTGATGCTTGTTGGACTTTGGAGTGCTTATCCTGACCCTAATTTAAGACCTTCAATAAGACAAGTAATTCAAGTTCTTAATTTTGAGACAACAATGCCAAATCTTCCAAGTAAAATGCCTGTTGCTGTGTATCATGCTCCTTCCACATCAATGAGCTCAAATGAACCAACAATTACTGCAAGTCTTGATGTGGGTCGTTGA 1974 39.26 MATSSYVFPMSSHLLFLLLLLSFLPPSIHSISFQIDRFKTNESDALYQGDALPSVGSVEFNNVNYLCRVGWIIYKDIVPIWDSKTGKTTDFTTHFTFLIDTQNVQNYGHGIAFFLAPIGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPYEHVGINVNSIASSNYTRWNASLHSGDIADVWISYNSTTKNLSVWWKYQSGSNSSENTTLSYQIDLMKVLPQWATIGFSAATGMYVERHTLFSWEFNSTLDINKASEDNGNKVNVIVGVTVSIGVSILIAIIAFVVLWRLKQKKRKSEEEKSEEVNLTSIYDDLERGAGPRRFSHKLLAMATNNFSNERKLGQGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHIFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMETESHKGLVEWVWDLYGSGQLIDGMDEKLMKSDYDQKQIECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPNLPSKMPVAVYHAPSTSMSSNEPTITASLDVGR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7370978 7372951 + CrPI670011_01g007290.1 Cre01g0729 488274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0729 657 FunFam L-type lectin-domain containing receptor kinase IX.1 29 271 - -
Cre01g0729 657 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Cre01g0729 657 PANTHER - 57 627 IPR050528 GO:0005886(PANTHER)
Cre01g0729 657 Gene3D - 28 287 - -
Cre01g0729 657 Pfam Legume lectin domain 31 270 IPR001220 GO:0030246(InterPro)
Cre01g0729 657 SMART serkin_6 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre01g0729 657 CDD STKc_IRAK 353 618 - -
Cre01g0729 657 FunFam Lectin-domain containing receptor kinase A4.3 424 637 - -
Cre01g0729 657 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre01g0729 657 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Cre01g0729 657 SUPERFAMILY Protein kinase-like (PK-like) 326 620 IPR011009 -
Cre01g0729 657 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre01g0729 657 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524(InterPro)
Cre01g0729 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre01g0729 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Cre01g0729 657 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Cre01g0729 657 CDD lectin_legume_LecRK_Arcelin_ConA 31 262 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0729 Cre-Chr1:7370978 Cre01g0733 Cre-Chr1:7420154 0.00E+00 dispersed
Cre01g0729 Cre-Chr1:7370978 Cre01g0730 Cre-Chr1:7382891 3.50E-54 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63809 PF00069 Pkinase 8.30E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0729 - - - 0.0