Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0826 ATGGCATCCTTCACTAACCTCATCTCAATCTTCTTCTTTCTCATCTGTTTTCTCACAACCCAAGCCGTTTCACAATCTAATGAATGTGAAACCACACCCAATTCATGCACTAATAAAGACCAAGCTTTACGTCTTAAAATCATTGCCATCTTCTCGATCCTCATTGCGAGCGTGATCGGTGTTGGCTCACCACTCGTCACCCGATCGATCCCGATGTTGCACCCTGATAGAAACATGTTCATCATCCTCAAAGCCTTCGCAGCGGGCATCATTCTCGCCACCGGTTTCATGCATGTTTTGCCTGATTCTTTCGACATGCTTTGGTCGAATTGTCTCAAGGAAAATCCATGGCATAAGTTTCCCTTTTCAGGTTTCGTCGCCATGATGTCAGCCATAGTCACCCTTATGGTGGATTCTATGGCTACTAGTTTGTATACCAAGAAACATACCGAAGTTATGCCTGAGAATTCTCCCAGAGGAGAAGATGATCATGAGTTGCCAGTGGCTAGTGGCGGCCATTTCCATGGCCACCATCATAGAGACACCAAGGAAACTAAGGCTGGTTCTCAACTCTTGCGCTATCGTGTTGTTGCCATGGTTTTGGAATTGGGAATTGTGGTCCATTCAGTTGTGATTGGACTTTCACTAGGAGCAACAAATGACACTTGCACAATCAAAGGTTTAGTGGCTGCTCTTTGTTTTCATCAAATGTTTGAAGGGATGGGTCTTGGTGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAAGCAATAATGGTATTCTTTTTCTCAGTGACAACCCCATTTGGAATAGCCCTTGGAATAGGGTTATCAAAGACATACAAAGAAAACAGCCCTAGTGCACTCATCACTGTGGGGTTGTTGAATGCTTCTTCAGCTGGCCTTCTCATTTACATGGCTTTGGTTGATCTTCTTTCTGCTGACTTTATGGGTCCAAAGTTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTATATTGCTGTGCTCTTAGGAGCTGGTGCCATGTCTTTAATGGCTAAGTGGGCTTGA 1053 44.35 MASFTNLISIFFFLICFLTTQAVSQSNECETTPNSCTNKDQALRLKIIAIFSILIASVIGVGSPLVTRSIPMLHPDRNMFIILKAFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHTEVMPENSPRGEDDHELPVASGGHFHGHHHRDTKETKAGSQLLRYRVVAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMVFFFSVTTPFGIALGIGLSKTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYIAVLLGAGAMSLMAKWA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9540266 9542878 - CrPI670011_01g008260.1 Cre01g0826 488371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0826 350 MobiDBLite consensus disorder prediction 152 185 - -
Cre01g0826 350 Pfam ZIP Zinc transporter 44 347 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cre01g0826 350 NCBIfam ZIP zinc/iron transport family 34 350 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cre01g0826 350 PANTHER ZINC/IRON TRANSPORTER 39 349 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0826 Cre-Chr1:9540266 Cre04g1927 Cre-Chr4:36810892 3.60E-103 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0826 K14709 - csv:101221552 654.825