Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0841 ATGGTTGGTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAATGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCGACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACATGTTCAATATGCCAGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGATAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGGTGGAAGGGAGGACTCAAAATTCACCATGCATTTGTCGAGAAGGTTGGAAACTAG 552 44.57 MVGFSYSSPHSNGDPMAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNMFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10424668 10425907 + CrPI670011_01g008410.1 Cre01g0841 488386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0841 183 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 16 176 - -
Cre01g0841 183 Pfam Phloem protein 2 26 175 IPR025886 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0839 Cre-Chr1:10305731 Cre01g0841 Cre-Chr1:10424668 1.40E-87 dispersed
Cre01g0841 Cre-Chr1:10424668 Cre04g2189 Cre-Chr4:39027114 8.60E-32 dispersed
Cre01g0841 Cre-Chr1:10424668 Cre01g0842 Cre-Chr1:10435985 2.60E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0841 - - - 0.0