Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0864 ATGGCTGCCGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACAAGAACATTGGTGACTGCGAAATTGAAACATTCCAGCAACCATTTCACGACTTTTCTCCTCCCACTTCGCACTCGCTCTCGAAGATTGACCATTCGTGCTGGTATCACAAACAATGAAGAAGTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTTCTTCGAACATTGTTTATGAGGATGATAAAGTCCTTGCATTCCGAGACATAAATCCACAGGCTCCTGTTCATGTATTAATCATTCCAAAGCTCAGAGATGGATTGACAGAGCTGGGAAAGGCTGAAGCAAGACATGGAGAGATACTGGGTCAGCTGCTGTATGCAGCCAAAATAGTGGCTGAAAAAGAGGGTATTGTTGAAGGATTCCGAGTAGTCATCAACAGTGGGGCAAGTGCTTGTCAATCTGTGTATCATCTTCACTTGCATGTCCTGGGAGGGAGACAGATGAAATGGCCTCCAGGTTGA 552 44.75 MAAGTSFLRQCIATTTRTLVTAKLKHSSNHFTTFLLPLRTRSRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIIAKEISSNIVYEDDKVLAFRDINPQAPVHVLIIPKLRDGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQMKWPPG 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11546122 11550467 + CrPI670011_01g008640.1 Cre01g0864 488409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0864 183 FunFam Histidine triad nucleotide-binding protein 1 53 183 - -
Cre01g0864 183 ProSitePatterns HIT domain signature. 156 174 IPR019808 -
Cre01g0864 183 ProSiteProfiles HIT domain profile. 73 183 IPR011146 GO:0003824(InterPro)
Cre01g0864 183 SUPERFAMILY HIT-like 71 182 IPR036265 -
Cre01g0864 183 PRINTS Histidine triad family signature 94 112 IPR001310 -
Cre01g0864 183 PRINTS Histidine triad family signature 163 173 IPR001310 -
Cre01g0864 183 PRINTS Histidine triad family signature 73 89 IPR001310 -
Cre01g0864 183 CDD PKCI_related 71 175 - -
Cre01g0864 183 Pfam HIT domain 80 177 IPR011146 GO:0003824(InterPro)
Cre01g0864 183 PANTHER HISTIDINE TRIAD HIT PROTEIN 52 183 IPR001310 GO:0005737(PANTHER)|GO:0006790(PANTHER)|GO:0009150(PANTHER)|GO:0016787(PANTHER)|GO:0047627(PANTHER)
Cre01g0864 183 Gene3D - 53 183 IPR036265 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0864 Cre-Chr1:11546122 Cre10g1807 Cre-Chr10:32479092 2.70E-46 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0864 - - - 0.0