Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0873 ATGGAAGATAATGAGTTAAAAAACAACAAAGAAATGACAATGGAGGATTCACACAATAAGCTTCTAGAAAACACTATAAAAAGCTACACAAAGCTCCATAGCTTCAAGCAAATTTTCAATGGCTTTGCAGTTCACACAACCCCATCACAAGCCTCAAAGCTTAGAGAAGTTGATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAGGAAAATGACTACTTATACCCCTGAGTTTCTAGGTCTAGTGCCCTCCAATAATCATAAATATTATTATAATTATAGTGTTATTGGTGGTGGTGGTGAAGGCATTTTGATTGGGTTTGTGGACTCTGGTATTTACCCAACACACCCAAGTTTTAGTTTTGGTAATTTTGATCATCAAGAAGAGGAGTTGTTTTGTGGGGTTTGTGAAGAAGGTCCTTTTTTCCCAAAAGCTTCTTGCAATGGGAAGATAGTGAGTGCAAGGTTTTTCTCTACTGGGGCTCAGGCTGTTGCAAAGCTCAACTCTTCCCTTGATTTTCTCTCTCCATTTGATGCTGAAGGCCATGGAAGCCATGTGGCATCCATAGCTGCTGGGAATGCAGGTGTTCCAGTTATTGTAAATGGTTTCTTCTATGGATTGGCCAGTGGAATCGCGCCACGTGCACGAATTGCTGTTTACAAGGCCGTGTATCCAACGGTGGCTACTCTAACCGACGTAATTTCAGCAATAGATCAAGCAGTGGTTGATGGGGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCGCCCGAGGTAGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACAAGAGCTGGAATCCTGGTTGTTCAAGCGGCCGGAAATAATGGCCCGGCCCGGGCAACCGTCGTCTCTTATAGCCCTTGGGCTATCGGTGTTGCAGCCTCCGGCACTGACAGAGTTTATTTGGCCTCACTTTTTCTTGGCAATGGCCAAAAAATTGGAGGAGTAGGACTGTCTGGACCTACTTTAGGGAGTGAGTTTCTCCTACATAAGCTAGTATTGGCTAAGGATGCAAAGAGGCCAAATGAAACACATTCCAACATACCAAATTACAATGAAGAGTGCCAAAATCCTGAAGCTTTTGACCCAAATATTGTTGAAAACAGCATAGTCCTCTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCCTCTCTTAAAGCCATCATTCACACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCCTTGCAAATCCAGACTATGGTGATTTCATTGCAGAGCCCATCCCTTTCAAAGTTCCGGGCATTCTCATCCCGGCCGTATCAGATACTAAGGTGATACTGAAATACTATGAAGAAAATACATGGAAGGATAGGAGGGGAATTGTTAGTGAATTTAAAGGGAAAGCAGGCATTGGAGAAGGAAGAGTTGCTTCATTTGGAAGGCAAGCAGCCAGTGTTAGCAGATTTTCATCAAGAGGACCAGATTACATTAACATAAATAGGACTATAGCTGATGTACTAAAGCCAGATATTCTTGCACCAGGTCACCAAATCTGGGCTGCTTGGAGCCCTCTTAGTGCCTCACAGCCACTTTTAAAGGGATACCATTTTGCACTGTTATCTGGAACAAGTATGGCAGCACCACATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGTATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTCGATTTTGGCGCTGGCCTCGTTTCTCCAACCAACGCTTTGGACCCGGGACTCGTCTTCCCTTCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGGGTTGATCCTACCGTCATCAGAAGCGCCACCGGAGGACAGTGCAATGCCTCTATCCCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACCATATCATCATTGGTTGGGAATCAGGTAGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACTTATGTGTGGTCAGTGATACCGCCAAATGGGACAACAGTCAACATCAATCCGCCATGGTTCACCGTAGCGCCCGAAGAAGTCCAAAACTTGGAAATACAAATCAATGTCACACACAAAATGGATCATTTTACCTTCGGGGAGATTATTTTGACAGGAAGTTTAAACCATATTGCAAGAATCCCTTTGTCAGTTTTGGCTGTTTCTGCATCCTGA 2304 43.49 MEDNELKNNKEMTMEDSHNKLLENTIKSYTKLHSFKQIFNGFAVHTTPSQASKLREVDGVKLVELDRGVRKMTTYTPEFLGLVPSNNHKYYYNYSVIGGGGEGILIGFVDSGIYPTHPSFSFGNFDHQEEELFCGVCEEGPFFPKASCNGKIVSARFFSTGAQAVAKLNSSLDFLSPFDAEGHGSHVASIAAGNAGVPVIVNGFFYGLASGIAPRARIAVYKAVYPTVATLTDVISAIDQAVVDGVDILALSVGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPARATVVSYSPWAIGVAASGTDRVYLASLFLGNGQKIGGVGLSGPTLGSEFLLHKLVLAKDAKRPNETHSNIPNYNEECQNPEAFDPNIVENSIVLCSFSQGFLNGTSSLKAIIHTATTLRFMGFVLLANPDYGDFIAEPIPFKVPGILIPAVSDTKVILKYYEENTWKDRRGIVSEFKGKAGIGEGRVASFGRQAASVSRFSSRGPDYININRTIADVLKPDILAPGHQIWAAWSPLSASQPLLKGYHFALLSGTSMAAPHIVGIAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHSLYPSTPFDFGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPTVIRSATGGQCNASIPQPHPADLNLPSVTISSLVGNQVVQRRVKNVGGKVETYVWSVIPPNGTTVNINPPWFTVAPEEVQNLEIQINVTHKMDHFTFGEIILTGSLNHIARIPLSVLAVSAS 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11809261 11820837 - CrPI670011_01g008730.1 Cre01g0873 488418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0873 767 ProSiteProfiles Serine proteases, subtilase domain profile. 77 620 - -
Cre01g0873 767 Gene3D Peptidase S8/S53 domain 103 633 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre01g0873 767 CDD PA_subtilisin_like 322 458 - -
Cre01g0873 767 Pfam Peptidase inhibitor I9 13 70 IPR010259 -
Cre01g0873 767 PRINTS Subtilisin serine protease family (S8) signature 179 192 IPR015500 -
Cre01g0873 767 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cre01g0873 767 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Cre01g0873 767 Pfam Fibronectin type-III domain 667 761 IPR041469 -
Cre01g0873 767 Pfam Subtilase family 101 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre01g0873 767 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 106 117 IPR023827 -
Cre01g0873 767 Gene3D - 313 483 - -
Cre01g0873 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Cre01g0873 767 Gene3D - 637 764 - -
Cre01g0873 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 720 IPR045051 -
Cre01g0873 767 SUPERFAMILY Subtilisin-like 72 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre01g0873 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 70 IPR037045 -
Cre01g0873 767 ProSitePatterns Serine proteases, subtilase family, histidine active site. 183 193 IPR022398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0873 Cre-Chr1:11809261 Cre11g1608 Cre-Chr11:26792491 1.70E-161 dispersed
Cre01g0873 Cre-Chr1:11809261 Cre09g0097 Cre-Chr9:1216869 4.90E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0873 - - - 0.0