Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0904 ATGGATTCTAGCACGAGCGGAGGCAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACCGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATTGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGAATTTAAGTTTGAGATCAATGGCCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGA 717 42.26 MDSSTSGGSYHTQAKWRKVAYGGMQPGFDDNHTDESFLEDIVMNANVVKRDILKVMLDSVSISEYLCIVTLVGLVWTYTLRSTLDENSLLFLDIGLLGSGFLILLFTEGSLSLSLLLHYFLNISYFTTGLYVLAPIYQTLTRSISSDSIWALAVSLIILHLFLHDYSGSTVRAPGDLKNPSLTSCISLNASIVASVLIASRLPSRLHVFGIMLFSLQEFKFEINGPWDEAKLCFDIRD 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12548729 12549640 - CrPI670011_01g009040.1 Cre01g0904 488449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0904 238 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 16 219 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Cre01g0904 238 PIRSF PIG-C 214 238 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Cre01g0904 238 PIRSF PIG-C 4 221 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Cre01g0904 238 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 214 237 IPR009450 GO:0000506(PANTHER)|GO:0006506(InterPro)|GO:0016020(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0904 K03859 - csv:101221254 392.119