Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g0946 ATGGCCATCTCCATTGCCTTCTCGACGAACACCCACTTCCCATTTTCTACAATTTGCAGATCAATTTCCTCTCTCAGTCCATCCCTCGATGTTCTTTTTAACGCCAGGAGAGATTGCAATCGTGGGTTTCCCTTAATTAGAACATTGGACACCAAATTGGCAAAAACCAGGGCTGCATTGTCTGAAATTTCTTACCGCAAGCAGTACCCAAAAGTGGGTGCCAAATCTATTGGACCCATTCCACCTGCCCAGCTAATTCAAGTCGTTGAGAATGCTGCCAAGACAGGAGCCGAGGTGGTGATGGATGCTGTTAATAAGCCTCGGAATATTGAATATAAAGGATTGGCGGACTTAGTAACGGAAACAGATAAAATGAGTGAGGCTGCTATTCTGGAAGTTGTTAGAAAGAACTTTAGAGATCACCTCATCCTTGGAGAAGAGGGAGGAGTTATAGGGGATTCATCATCTGATTATCTTTGGTGCATTGATCCTTTAGATGGAACAACAAATTTTGCACATGGCTATCCTTCCTTTGCAGTATCTGTCGGAGTTTTATTTCGGGGAAATCCTGCTGCTGCAGCTGTGGTAGAGTTTGTTGGGGGTCCTATGTGCTGGAACACTCGCATATTTACTGCAACTGCTGGTGGGGGAGCATTCTGTAATGGCCAAAAGATTAATGTGAGTCAAACTAGCCAGGTGGAACGATCTCTTCTAGTTACAGGATTTGGATACGAACATGATGATCCATGGGCTACAAATATGGATTTATTTAAAGAATTCACAGATGTCAGCAGGGGAGTAAGAAGGCTCGGTGCAGCAGCAGTCGACATGAGCCATGTAGCTCTAGGAATTGTAGAAGCATATTGGGAGTATCGCCTGAAGCCATGGGATATGGCTGCAGGTGTTTTGATAGTTGAAGAAGCAGGTGGAGCAGTGACTCGCATGGATGGTGGAAAGTTCAGTGTCTTTGATAGATCTGTTTTGGTTTCTAATGGTGTTGTACATGACAAGCTTTTGGAGAAAATTGGTTGTGCAACAGAAAAACTAAAAAGCAAAGGAATTGATTTCTCATTGTGTTATCACTTCTCACGTCTCCAAGCAATTTTTGCTTTGAGAGTTTGA 1122 43.4 MAISIAFSTNTHFPFSTICRSISSLSPSLDVLFNARRDCNRGFPLIRTLDTKLAKTRAALSEISYRKQYPKVGAKSIGPIPPAQLIQVVENAAKTGAEVVMDAVNKPRNIEYKGLADLVTETDKMSEAAILEVVRKNFRDHLILGEEGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGNPAAAAVVEFVGGPMCWNTRIFTATAGGGAFCNGQKINVSQTSQVERSLLVTGFGYEHDDPWATNMDLFKEFTDVSRGVRRLGAAAVDMSHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGAVTRMDGGKFSVFDRSVLVSNGVVHDKLLEKIGCATEKLKSKGIDFSLCYHFSRLQAIFALRV 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14082712 14090726 - CrPI670011_01g009460.1 Cre01g0946 488491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g0946 373 FunFam Inositol-1-monophosphatase 226 355 - -
Cre01g0946 373 FunFam Inositol-1-monophosphatase 82 225 - -
Cre01g0946 373 SUPERFAMILY Carbohydrate phosphatase 84 342 - -
Cre01g0946 373 Gene3D - 83 225 - -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 117 137 IPR000760 -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 160 176 IPR000760 -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 139 155 IPR000760 -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 293 317 IPR000760 -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 215 238 IPR000760 -
Cre01g0946 373 PRINTS Inositol monophosphatase superfamily signature 262 283 IPR000760 -
Cre01g0946 373 PANTHER INOSITOL MONOPHOSPHATASE 84 344 - GO:0006020(PANTHER)|GO:0007165(PANTHER)|GO:0008934(PANTHER)|GO:0046855(PANTHER)
Cre01g0946 373 Pfam Inositol monophosphatase family 84 342 IPR000760 -
Cre01g0946 373 CDD IMPase 85 331 IPR033942 GO:0008934(InterPro)
Cre01g0946 373 Gene3D - 226 349 - -
Cre01g0946 373 ProSitePatterns Inositol monophosphatase family signature 1. 160 173 IPR020583 -
Cre01g0946 373 ProSitePatterns Inositol monophosphatase family signature 2. 296 310 IPR020550 GO:0046854(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0946 Cre-Chr1:14082712 Cre01g0962 Cre-Chr1:14741882 1.40E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g0946 K01092 - csv:101218450 674.855