Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1043 ATGAAGATATCTAATTCCATCTTTATTTTATTTTCATTATTCCTTTTGTTAATATCACCTGCCATTGCTGCTAAAAAGTCATATGTTGTGATATTGGGATCCCACTCACATGGGTTAGAAGTTACTGAGGAAGATCTTGAAAGGGTGGTTCATTCCCATCACAAATTGCTTGGATCCTTCTTGGGCAGTGATGAGAAGGCAAAAGAGGCCATATTTTACTCCTATAAGAGGCATATTAACGGCTTTGCAGCTATTGTGGAGGAGGAAGACGCAACCCAACTTGCAAATCATCCCGAGGTAGCAGCAGTATTGCCAAACAGAGCGAAAGAATTACACACAACACATTCATGGGAATTTATGCATTTGGAGAAGAATGGGGTGATTCCTCCTTCATCTCCTTGGCACAGGGCTAAATCTGGAAAAGATGTCATTATTGCCAACCTTGACACTGGTGTATGGCCAGAGTCCAAGAGTTTTGGAGAACATGGCATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGCACCGATAAAACCCCTGATCGAGTGCCTTGTAACAGGAAATTAATCGGAGCAAAGTACTTCAACAAGGGCTTCCTCGCCTACTTGAAATCTGAAAATTATACGGACCTCTCATCTGTCATCAACTCCACTCGCGATTACGAAGGTCATGGGTCTCACACCTTGTCCACGGCCGGGGGCAGCTACGTGTCTGGTGCCAGCGTGTTTGGGTCGGGTGTCGGAACTGCCAAAGGTGGATCTCCCAAGGCTCGCGTTGCTGCCTACAAGGTCTGCTGGCCACTTGAGGGTGGTGGGTGCTTCGATGCCGACATCGCCGAGGCATTTGACCATGCCATCGATGATGGTGTCGATGTTCTTTCACTCTCCCTCGGCGGCGATCCAGCCGATTACTTTGGCGATTCCATTGCCATTGCCTCTTTCCATGCAATGAAGAAGGGTATCCCTGTGGTGTGCTCTGCCGGCAACTCCGGCCCTGATGCCTGGACTGTTTCTAATACTGCACCTTGGATTTTGACGGTTGCTGCAAGTACTTTAGACCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGCCATCGTTACATGGGTTCGAGCCTTTCGAAAGCATTGAGAGAAAAGAAGTTGTACCCATTGATTACGGGAGCTCAGGCGAAAACAAAGAATGCCACAGCGGATGAGGCCATGCTTTGCAAGCCGGAAACATTGGATCATTCAAAAGTAAAAGGGAAGATACTGGCTTGCTTGAGAGGAGACAATGCAAGAGTGGAGAAAGGAGAACAAGCTGCTCTTGCCGGTGCTGCCGGAATGATTCTATGCAACGATATGCTTAGTGGATTTGAAACCATTGCTGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCAATTCCACCAAAAATCCAATGGGTTATTTAATCCCACCATCGGCTAAAGTTAACACCAAGCCTGCTCCCTCTATGGCGGCCTTCTCATCTCGAGGACCCAACTTTATTTCACCCGAGATTATCAAGCCGGATGTGACTGCACCTGGCGTAAACATAATCGCCGCATTCTCAGAAGCCGTAAGCCCAACAGGTGAGGCATTCGACAACAGAACGGCTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCCCACGTGGCAGGCCTGGTTGGCCTCCTCCGAACTCTCCACCCTCACTGGAGCCCTTCTGCCATCAAATCTGCCATCATGACCTCTGCCAGGGTTCTTGACAACACAATGAAACCCATGCTTGACGGTGGCTCCCCTGACCTCGCCCCTGCCACCCCCTTCGCCTACGGCTCCGGCCACATTCGCCCCGTGGGAGCCATCGACCCTGGCCTCGTCTATGACCTCTCACCCAACGACTACTTGGAATTCCTCTGCGCTAGCGGGTACGATGAGAAGAGCATTCGGGCATTCTCTGACGGCCCTTTCAACTGCCCTGCCTCTGCTTCTATTTTGAACTTCAATTACCCCTCCATTGGGGTTCAGAATTTGAATGCAAGTGTCACCCTCACTAGGAAGCTGAAGAACGTTGGCACTCCTGGGGTTTACAGACCCAAAATTCTCCACCCGGATGGAGTTAAAGTTTCAGTGAAGCCTAGAGTTCTCAAGTTTGAGAGAGTTGCAGAGGAGAAGAGCTTTGAATTGACCATCACCGGAGCTGTGCCGGAGAATCAGGTTGTTAACGGCGTGTTGATTTGGACGGACGGCAAGCACTTTGTTAGAAGTCCCATTCTCGTTTCTTCTAACTTGTTCTGA 2325 49.2 MKISNSIFILFSLFLLLISPAIAAKKSYVVILGSHSHGLEVTEEDLERVVHSHHKLLGSFLGSDEKAKEAIFYSYKRHINGFAAIVEEEDATQLANHPEVAAVLPNRAKELHTTHSWEFMHLEKNGVIPPSSPWHRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTPDRVPCNRKLIGAKYFNKGFLAYLKSENYTDLSSVINSTRDYEGHGSHTLSTAGGSYVSGASVFGSGVGTAKGGSPKARVAAYKVCWPLEGGGCFDADIAEAFDHAIDDGVDVLSLSLGGDPADYFGDSIAIASFHAMKKGIPVVCSAGNSGPDAWTVSNTAPWILTVAASTLDREFQAPVELQNGHRYMGSSLSKALREKKLYPLITGAQAKTKNATADEAMLCKPETLDHSKVKGKILACLRGDNARVEKGEQAALAGAAGMILCNDMLSGFETIADPHVLPASHINYNDGQAVLSYINSTKNPMGYLIPPSAKVNTKPAPSMAAFSSRGPNFISPEIIKPDVTAPGVNIIAAFSEAVSPTGEAFDNRTAPFITMSGTSMSCPHVAGLVGLLRTLHPHWSPSAIKSAIMTSARVLDNTMKPMLDGGSPDLAPATPFAYGSGHIRPVGAIDPGLVYDLSPNDYLEFLCASGYDEKSIRAFSDGPFNCPASASILNFNYPSIGVQNLNASVTLTRKLKNVGTPGVYRPKILHPDGVKVSVKPRVLKFERVAEEKSFELTITGAVPENQVVNGVLIWTDGKHFVRSPILVSSNLF 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17328766 17332763 + CrPI670011_01g010430.1 Cre01g1043 488588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1043 774 Gene3D Peptidase S8/S53 domain 142 644 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre01g1043 774 Gene3D - 354 498 - -
Cre01g1043 774 Gene3D - 648 772 - -
Cre01g1043 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 53 767 IPR045051 -
Cre01g1043 774 SUPERFAMILY PA domain 412 483 IPR046450 -
Cre01g1043 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Cre01g1043 774 FunFam Subtilisin-like protease SBT1.5 648 772 - -
Cre01g1043 774 Pfam PA domain 401 475 IPR003137 -
Cre01g1043 774 ProSiteProfiles Serine proteases, subtilase domain profile. 116 631 - -
Cre01g1043 774 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Cre01g1043 774 Pfam Fibronectin type-III domain 676 769 IPR041469 -
Cre01g1043 774 FunFam subtilisin-like protease SBT1.5 354 497 - -
Cre01g1043 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Cre01g1043 774 CDD Peptidases_S8_3 109 594 IPR034197 -
Cre01g1043 774 CDD PA_subtilisin_like 361 490 - -
Cre01g1043 774 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cre01g1043 774 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Cre01g1043 774 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Cre01g1043 774 SUPERFAMILY Subtilisin-like 111 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre01g1043 774 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Cre01g1043 774 FunFam Subtilisin-like protease SBT1.5 142 367 - -
Cre01g1043 774 Pfam Subtilase family 140 600 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1043 Cre-Chr1:17328766 Cre02g0642 Cre-Chr2:3362212 3.90E-251 dispersed
Cre01g1043 Cre-Chr1:17328766 Cre04g1357 Cre-Chr4:32375499 9.20E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1043 - - - 0.0