Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre01g1139 | ATGTCGGGCAGCGAATTACTCTTCTCTCTGCCCACCGCAATTTCCCTTCTCTTCTTCTCCTTCACGGCGGCCTTCACAATTTTTTCTTTCTCTCTTTACATCCTCCGCCTTAACCCATGCTGCAATTGCTGTGTTTGCCGCAGCTATCTTTCTTCTTCGTGGTCTTTCTCTTTCCCCAACTTATCAGATTGGTACACTCACCTTCTTTCCCTTTCCCCCACCGCCACCATCCACCTCCACGTCCTCTCCAACATCGTCACCGCCAACCCCGACAACGTCCAACACATCCTCAAATCCAACTTTCATAACTATCCCAAAGGAAAACCATTCTCTTCCATCCTCGGCGACCTTCTCGGCCACGGCATTTTCAATGTCGATGGTCATTCTTGGCGGTTCCAACGCAAGATGGCTAGCTTGGAACTCGGGAGCTTGTCGCTGCGGTCTCACGCTTTCGAGATTTTAACTACTCAGATTCAGACAAGGTTGGTTCCTGTGATGAAGGATGTTGGGGAAGTGGATTTGCAAGATGTGTTTAGGAGGTTTTCGTTTGATAATATTTGTAGATTTTCGTTTGGGTTGGATCCAGGGTGTTTGAGGTTGTGTTTGCCCATATCGGAGTTTGCGGTGGCGTTTGATTTGGCGTCGAGGTTATCGGCGGAAAGGGCTATGGCGGCGTCGCCGATTATGTGGAAGATTAAGAGGGTTTTGAGAGTGGGATCGGAGAGGAAGCTTAGAGAAGCTATTAAGATGGTGGATGGGTTAGCGATGGAAGTTATAAGGCAACGGAGGGAGATGGAGTTTTCACATAGGAATGATCTTCTCTCTAGATTCATGGCTTCTACCAATGATGATCGATATCTTAGAGACATTGTTGTTAGCTTTCTCCTCGCCGGTCGGGACACGGTGGCGTCGGCGTTGACTAGCTTATTCTGGCTACTTTCCCAAAACCCGGAAGTAGAGACTAAAATTATCTCCGAGTCAGACCGGATCATGGGACCGGACCGAGACACGGTCCCCAGTTTTGACAATCTTAAGGACATGCACTACCTCCAAGCAGCGGTCTACGAAAACATGCGTCTCTTTCCACCGGTTCAGTTCGATTCCAAGTTTGCCGAGGAAGACGACATCTTGCCGGACGGTACATTTGTCCAAAAGGGCACTAGGGTAACTTACCACCCCTACGCCATGGGCCGAATGGACCGGATTTGGGGACCCGATTGTCTCGAGTTCAAACCAGAGAGGTGGCTCAAGAATGGCTACTTTGCGCCCGAAAACCCGTTTAAGTTCCCGGTTTTTCAGGCCGGTTTAAGGGTTTGTTTAGGTAAGGAGCTAGCCGTGATGGACGTGAAATGTGTCGGAGTGGTATTGATTCGGAAGTTTAAGATCCGGTTGGCAGGAGCCGATCGGGTTGCTCGGTTTGCTCCCGGTCTAACGGCCAGCTGGAGAGGTGGGTTACCGGTTCGAATTGAAGAAAGAACCACTTGTTAA | 1488 | 49.66 | MSGSELLFSLPTAISLLFFSFTAAFTIFSFSLYILRLNPCCNCCVCRSYLSSSWSFSFPNLSDWYTHLLSLSPTATIHLHVLSNIVTANPDNVQHILKSNFHNYPKGKPFSSILGDLLGHGIFNVDGHSWRFQRKMASLELGSLSLRSHAFEILTTQIQTRLVPVMKDVGEVDLQDVFRRFSFDNICRFSFGLDPGCLRLCLPISEFAVAFDLASRLSAERAMAASPIMWKIKRVLRVGSERKLREAIKMVDGLAMEVIRQRREMEFSHRNDLLSRFMASTNDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVETKIISESDRIMGPDRDTVPSFDNLKDMHYLQAAVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLEFKPERWLKNGYFAPENPFKFPVFQAGLRVCLGKELAVMDVKCVGVVLIRKFKIRLAGADRVARFAPGLTASWRGGLPVRIEERTTC | 495 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 21893252 | 21895978 | - | CrPI670011_01g011390.1 | Cre01g1139 | 488684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre01g1139 | 495 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | CDD | CYP86A | 73 | 485 | - | - | |
| Cre01g1139 | 495 | Pfam | Cytochrome P450 | 73 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PANTHER | CYTOCHROME P450 | 38 | 484 | - | - | |
| Cre01g1139 | 495 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | Gene3D | Cytochrome P450 | 57 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre01g1139 | 495 | SUPERFAMILY | Cytochrome P450 | 55 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre01g1139 | Cre-Chr1:21893252 | Cre10g2027 | Cre-Chr10:34913861 | 3.10E-177 | dispersed | |
| Cre01g1139 | Cre-Chr1:21893252 | Cre06g2639 | Cre-Chr6:33995642 | 1.20E-117 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre01g1139 | K20624 | - | csv:101207724 | 887.1 |