Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1151 ATGGTGGAAGAGGAAAGGAAACAGGTCTTCAAAGGAGGTTGGGTAACGACGTTGGATGTTCCCCCCTTCCTCAGAACTAAGGAGTTTATCGCCTACATGGCAGAGTGGTGTGGAGGATTGATTGACAAAGAGTTAGATTGTTGGAGATTGAATTGGTTGGAGGAAGTATGCTTCAAAGCGAAAGGTAATGTGGACGGTTTTATTCCGATGGGTTGTTATGTTAATCACTCAGAGTTTGCATTTTCGTTGAGGTTCTATGTTGGTTGGAAAAGGGAAGAAGATAATCAGAAGCGGTCAGAGAGTCCTTCGATTAAAGTTGTTTCGTGGTCCTTTGGTCTATTATGTGGTCAGAAAGAAAAGGAGACAGGTGGTCACGTGATTAATTTAGGGAAGAGGGAACGAGGTAGGGTTCAGGAGCATGATGGTCAAGAGGATGGGCTAGTTCGTAGCAGTTCCCAAATGCCCGATTTGGGCACCAAGGCCACAGTTGAAGCTAAAAAACGGGCTATTTTGGAAAGAGCCCAAGAAGGGATTCAAGCCCATGAGCCGATTGTTCAACTCGCTTGTACTTTAGGAGCGCTGGAGACCCATTCTATGAGAGTCGTGGAAGAACATCAAGGAATGAGATGGGAGCTAGAGGTGGGTGTCGGGCCGTCGGATCCTTTAGCTAAAGATGGGGATCTTGGATCCGACCCATCGGTTGTTAGTTATTCTGACGATGAATCGTTTCTCTCAACTTCGATGTTGAACAAAGCGACGGAGAAGGGTGTCGAGGGGCTGTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTTGAAAGTGTTGTTTGAGCAAGTGAGCTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGTTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCTGCCTTTTGATAGAGGTTATTCCTCAGGTCTTGCTATTGGGTCTTGCTTCTACTCCTATCCGATGGTAAGTACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGTCATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTTAGTTTTGAGAGTTTCTATCACCCTTTGGTCTTTCTATAACCCTTTTCTCATCCGAGGGGATTCCTTCTTGATCCTTAATCACATGGTTGAGTTTTTTGAAGCCATGTCTGATCTTAAAATTAACAGAGCAAGTGTCAAATTTTGGGGATTAATAGTGACCTTGAGAAGATTGAGAGATGGGCAGAGATGTTTGGCTGTGAGGTTGGATCATTCCCTTCTTCTTATCTTGGGCTTCCCTTGGGAGGTGATTGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACAAATTATTATATACAGGCTCTTGTTAGCCCGTTTCTTCTGGATGATTCTGCCGAAAATGTTGGTGGAAGTTGCTCCATTTATCCTGGAGATGAAGAGCTGGGTATTGAGTTGAATGAGGGAAGAGATGGTTTGAAGTATGACCATAACCATCTTAAAGAGATTGATCCAGTTTCGGCTAACAGAATCCACCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGAACGGCTAATGAGAATTGGGGTCAAGCTGATAGTTTCAGATATGATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTGATTCTAGAGTTGATAGCATGATGGCTGCTGGATTACTTGATGAGGTTTATGACATTTACAATCCAAATGCAAACTATACTAAAGGAGTGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGATATTATGTACCTAAAGGTAGATGCGAAAAAGATAGTGCTGGCCTTAGCCCAAAAAAAATAATGGAGTGTAATGAGATTGAGAATATAAGGTCAATCCTGAATTCACCAAGTAATAGCCAACCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAAGAGACTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGATTATATAACATGCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCGGGGACTGAAACAATGAACCCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCATGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACACATCGAAAACGAATGTATCAGCTTAAGAAGAAGTGTGAAGGGCTTTCCTTGCTGCAACAGAAACTACCTCTTCAAGAATAA 2550 43.33 MVEEERKQVFKGGWVTTLDVPPFLRTKEFIAYMAEWCGGLIDKELDCWRLNWLEEVCFKAKGNVDGFIPMGCYVNHSEFAFSLRFYVGWKREEDNQKRSESPSIKVVSWSFGLLCGQKEKETGGHVINLGKRERGRVQEHDGQEDGLVRSSSQMPDLGTKATVEAKKRAILERAQEGIQAHEPIVQLACTLGALETHSMRVVEEHQGMRWELEVGVGPSDPLAKDGDLGSDPSVVSYSDDESFLSTSMLNKATEKGVEGLFSEDANAQGDSNPNPLLKVLFEQVSWDGLVSNGDVAQVKVPKAVDGVVDTKVMNKTGFENQKALPFDRGYSSGLAIGSCFYSYPMVSTVGNMSQVSPLSLVSYPPSELGLLESEAGVIPSNLLFSFPCNVGGGDGRLVLRVSITLWSFYNPFLIRGDSFLILNHMVEFFEAMSDLKINRASVKFWGLIVTLRRLRDGQRCLAVRLDHSLLLILGFPWEVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSAENVGGSCSIYPGDEELGIELNEGRDGLKYDHNHLKEIDPVSANRIHPNNHRKINQYLSLYYRTGVLPSTLFQGTANENWGQADSFRYDCCLICVDASVPQLDGHVDSRVDSMMAAGLLDEVYDIYNPNANYTKGVRQAIGVREFEEFLRYYVPKGRCEKDSAGLSPKKIMECNEIENIRSILNSPSNSQPSLLLKEAIDNVKLNTRRLVRRQRRQLKRLETLFGWKIHYVDSTDYITCKVEDSWTAQVVEPAVQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYQLKKKCEGLSLLQQKLPLQE 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22901927 22918576 + CrPI670011_01g011510.1 Cre01g1151 488696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1151 849 Gene3D - 527 587 - -
Cre01g1151 849 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 479 784 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
Cre01g1151 849 Gene3D - 431 797 IPR027417 -
Cre01g1151 849 Gene3D Classic Zinc Finger 798 837 - -
Cre01g1151 849 FunFam tRNA dimethylallyltransferase 794 836 - -
Cre01g1151 849 Pfam IPP transferase 478 730 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1107 Cre-Chr1:20134186 Cre01g1151 Cre-Chr1:22901927 9.50E-42 dispersed
Cre01g1108 Cre-Chr1:20134807 Cre01g1151 Cre-Chr1:22901927 6.80E-14 dispersed
Cre01g1151 Cre-Chr1:22901927 Cre09g1906 Cre-Chr9:37797376 5.90E-51 dispersed
Cre01g1151 Cre-Chr1:22901927 Cre06g1334 Cre-Chr6:7353021 7.50E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1151 K00791 - csv:101202758 655.981