Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre01g1186 | ATGTCTCGCCGAGGCAGTGGCGGGGGCGGGGGCGGCGGTCGTGGTTCAGGTGGTCGTGGGGGACAGCCGTCTCCGGCTATATCTCGCGGCGGCGGTGGCAGAGGTGGACGAGGCGGTGGAGGGAGAGATGGAGGTAGAGTAGGTCATCCAGCTTCTCAGCAGTTTCCTTCTTCGACTCCTCAGCCTACTCCGGTTGCTACCCCTCCTCCTCCCCAGACTTCTACGGGAGCATCTTCTTCATCCTCGTCAGGTACTGCTACTCACTCACAGCCCGAGGTTTCGAGGATTGAGGCACAAGTGGAGAAGATGACATTGACGCCGCAGAAAGTTCCGCCGTCTTCATCTAAAGATTTGGCTGTGGCGAAGAGGCCGGGATATGGAACCATTGGGCACAAAGTTGTTGTTCGAGCTAATCATTTTCTGGTTCATGTTGCAGACAAAGATCTCTACCATTACGATGTTTCCATTACACCTGAGGTTACATCCAAAAAGGTCTGCCGAGAAATTATAGACCAGCTTGCAAAAATGTATAGAGAATCTCATTTGGGTGGAAGATATATAGCATATGATGGTGGAAAAAGTGTTTATGTTGCTGGTCAACTTCCATTTTCGTCCAAAGAGTTCATGATTAAATTAGTCCGTAAAGATGATGCTGGGTCTTCCCAACCAACAAGGAAAGAACGCGAGTTCAAAGTGTCTATCAAATTCGCTTCCAAGCCAGACCTCCATCATCTACAACAGTTTTTACATGGACGGCAGCGAGATGCTCCTCAGGAGACTATACAAGTTCTTGATGTTGTTTTGAGAACAAAACCATCTTTCAAATACACAGTTGTTGGAAGGTCTTTTTTCTCGCTTACTTTGGGGGAACCAGGTGAACTGGGTAATGGTGTTGAGTACTGGAGGGGATATTACCAAAGTCTACGACCTGTACAAATGGGTCTCTCTTTGAATATAGATGTGTCAGCTAGGTCATTTTATGAACCAATATGTGTGACAGACTATGTTGCTAAACACTTCAACCTAAGAAATTTCTCGAAGCCAATATCTGATCAGGATTGTCGCAAGATCCGAAGGGTACTTAAAGGTGTGAAGGTGGCATTAACGTGTAGGGAGCATGCCAGGACCTACAAAATTACTGGGATATCATCAGAGCCTGTAAACAGATTAATGTTCACTCTTGATGATCAGAGAACCCGAATCTCTGTTGCACAATACTTTCGTGAAAAATATGGTGTTGTGCTCAAATTTCCATCTCTACCGGCTATACAAGCTGGTAATGATGCGAAGCCCATCTATCTGCCTATGGAGGTTTGTAGGATTGTTGGTGGGCAAAGATATACCAAAAAATTGAATGAACGCCAAGTAACTGAGATGTTAAGAGCGACTTGTCAGAGGCCTTTAGACAGGGCAAACAGTATAAAGAAGATGGTTGAAAAGAACGATTATTCTAAAGATGAAACTGTTACGGATTTTGGCATTAATGTTGTACAACAGTTATGTGATGTTGATGCTCGTGTTTTGCCGTCCCCAATGCTCAAATATCATGAAACTGGCAAAGAATCGAGAGTAGATCCAAGGATGGGTCAATGGAATATGATCAATAAGAAAATGATCAATGGTGGTAGAGTTGATTATTGGGGCTGCGTGAACTTCTCTTCACGGTTGGATCCAGGCCTGCCATCCGAATTTTGCCACCAGTTGGTTAGCATGTGCAATAGCAAAGGAATGGTTTTCAACCCTACTCCGCTGTTTCCTGTACGCACTGCACATGCAAATCAAATTGATGGTGTCCTTAGAGACATTCATAGTCAGTCTGTAAAAAGTCTGGGAGCCCAGGGCAAGTCTCTTCAGTTGCTCATAATCATTTTACCTGATGTTTCTGGTTCCTATGGGAAGATCAAAAGGATATGTGAGACTGAGCTTGGAATTGTTTCACAATGTTGCCAGCCTAGGCAGGCGCAAAAGCTAAACAAGCAGTACTTTGAAAATGTGGCCCTTAAAATTAATGTTAAGGTTGGGGGAAGAAACAATGTCCTTAATGATGCTATTCAGCGAAGAATTCCTCTTGTTACGGATCGGCCTACAATAATCATTGGAGCAGATGTAACACATCCACAACCAGGAGAGGACTCCAGTGCTTCAATAGCAGCTGTTGTTGCCTCTATGGACTGGCCTGAGGTAACGAAGTATAGAGGAATCGTTTCAGCTCAGGCTCACCGTGAAGAAATTATACAAGATTTGTACAAAGAGAGTCAAGATCCTCAGAAAGGATTGGTGCGTGCGGGAATGATTAGGGAGCTGTTCATTGCTTTTAGAAGGTCAACGAATATGAAACCGCACAGAATAATATTCTACAGGGATGGTGTAAGTGAAGGACAGTTCTCTCAAGTTCTATTTTATGAGGTGGATGCAATCAGGAAGGCATGTGCCTCGCTTGAAGATGGTTACCAGCCTCCAATAACCTTTGTAGTGGTGCAAAAGAGACATCATACCCGTCTTTTCCCCACTGGTCGGGAAACTGATCGAAGTGGAAACATCCTTCCAGGTACCGTTGTCGATACGAAAATTTGCCATCCAACTGAATTTGATTTCTACTTAAACAGCCATGCTGGCATTCAGGGGACAAGTAGACCAACGCATTATCACGTTTTATATGATGAAAACAAATTCACTGCTGATGCAATGCAAATGCTTACGAATAATCTATGCTACACGTATGCAAGGTGCACACGGTCTGTTTCCATTGTTCCACCAGCATACTATGCCCATCTTGCAGCCTTTCGTGCTCGTTATTACATGGAGGGTGATTCATCCGACAGCGGTTCGACGAGTTCAGGTGGTGGGAACGTAGAGATTCAACGGCTGCCAAGCATAAAAGAAAATGTGAAGGATGTCATGTTTTACTGTTGA | 2913 | 44.52 | MSRRGSGGGGGGGRGSGGRGGQPSPAISRGGGGRGGRGGGGRDGGRVGHPASQQFPSSTPQPTPVATPPPPQTSTGASSSSSSGTATHSQPEVSRIEAQVEKMTLTPQKVPPSSSKDLAVAKRPGYGTIGHKVVVRANHFLVHVADKDLYHYDVSITPEVTSKKVCREIIDQLAKMYRESHLGGRYIAYDGGKSVYVAGQLPFSSKEFMIKLVRKDDAGSSQPTRKEREFKVSIKFASKPDLHHLQQFLHGRQRDAPQETIQVLDVVLRTKPSFKYTVVGRSFFSLTLGEPGELGNGVEYWRGYYQSLRPVQMGLSLNIDVSARSFYEPICVTDYVAKHFNLRNFSKPISDQDCRKIRRVLKGVKVALTCREHARTYKITGISSEPVNRLMFTLDDQRTRISVAQYFREKYGVVLKFPSLPAIQAGNDAKPIYLPMEVCRIVGGQRYTKKLNERQVTEMLRATCQRPLDRANSIKKMVEKNDYSKDETVTDFGINVVQQLCDVDARVLPSPMLKYHETGKESRVDPRMGQWNMINKKMINGGRVDYWGCVNFSSRLDPGLPSEFCHQLVSMCNSKGMVFNPTPLFPVRTAHANQIDGVLRDIHSQSVKSLGAQGKSLQLLIIILPDVSGSYGKIKRICETELGIVSQCCQPRQAQKLNKQYFENVALKINVKVGGRNNVLNDAIQRRIPLVTDRPTIIIGADVTHPQPGEDSSASIAAVVASMDWPEVTKYRGIVSAQAHREEIIQDLYKESQDPQKGLVRAGMIRELFIAFRRSTNMKPHRIIFYRDGVSEGQFSQVLFYEVDAIRKACASLEDGYQPPITFVVVQKRHHTRLFPTGRETDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFTADAMQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYMEGDSSDSGSTSSGGGNVEIQRLPSIKENVKDVMFYC | 970 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 24055506 | 24062513 | + | CrPI670011_01g011860.1 | Cre01g1186 | 488731 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre01g1186 | 970 | Gene3D | - | 687 | 970 | IPR036397 | GO:0003676(InterPro) | |
Cre01g1186 | 970 | FunFam | protein argonaute 10-like | 687 | 970 | - | - | |
Cre01g1186 | 970 | SMART | Piwi_a_2 | 619 | 935 | IPR003165 | GO:0003676(InterPro) | |
Cre01g1186 | 970 | SUPERFAMILY | Ribonuclease H-like | 614 | 936 | IPR012337 | - | |
Cre01g1186 | 970 | SMART | PAZ_2_a_3 | 332 | 465 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre01g1186 | 970 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Cre01g1186 | 970 | CDD | Piwi_ago-like | 487 | 934 | IPR045246 | - | |
Cre01g1186 | 970 | ProSiteProfiles | PAZ domain profile. | 331 | 443 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre01g1186 | 970 | Gene3D | paz domain | 324 | 447 | - | - | |
Cre01g1186 | 970 | Pfam | Piwi domain | 620 | 934 | IPR003165 | GO:0003676(InterPro) | |
Cre01g1186 | 970 | Pfam | N-terminal domain of argonaute | 132 | 268 | IPR032474 | - | |
Cre01g1186 | 970 | CDD | PAZ_argonaute_like | 329 | 442 | - | - | |
Cre01g1186 | 970 | FunFam | Argonaute 10 | 507 | 681 | - | - | |
Cre01g1186 | 970 | SUPERFAMILY | PAZ domain | 326 | 483 | IPR036085 | GO:0005515(InterPro) | |
Cre01g1186 | 970 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 123 | 956 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cre01g1186 | 970 | Pfam | PAZ domain | 353 | 460 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cre01g1186 | 970 | Pfam | Argonaute linker 1 domain | 279 | 328 | IPR014811 | - | |
Cre01g1186 | 970 | MobiDBLite | consensus disorder prediction | 72 | 93 | - | - | |
Cre01g1186 | 970 | Pfam | Argonaute linker 2 domain | 469 | 515 | IPR032472 | - | |
Cre01g1186 | 970 | Gene3D | - | 507 | 682 | - | - | |
Cre01g1186 | 970 | SMART | DUF1785_2 | 277 | 329 | IPR014811 | - | |
Cre01g1186 | 970 | Pfam | Mid domain of argonaute | 526 | 604 | IPR032473 | - | |
Cre01g1186 | 970 | ProSiteProfiles | Piwi domain profile. | 619 | 935 | IPR003165 | GO:0003676(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g1186 | Cre-Chr1:24055506 | Cre01g1584 | Cre-Chr1:28930605 | 2.60E-305 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre01g1186 | K11593 | - | csv:116403995 | 1656.34 |