Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1187 ATGGCGCTCTCTCTACCCCTACAACTCATCCGTTTCCCTCCTCAACCATTATCCTCATCCTCTCAACATCTTCTCATCTCTGACCTCGCCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGGCTCCGTCGCGGAGCTGCACGATGAAGTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGCGAATCGGAAGCGTTGGTGTCCGATGTGGACGGAGGGGGAGATCTTGAGGATGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAAAAATTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATCCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGATGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCATTGAGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCGGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAGTTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCCGGGATAATTAGACAGGAGAATCCTGTAGCTAAGTACTTGTTCAGGTCATTCAACACTCAATCTTGGAGGGGCTGCTATATCCCAGTGATGAGGATGCAAATTGTGAAGGCTGCATATATTATTAGGCCATGCGCCAATATTGGCACCATCACTCAGTTTGGTTTATGA 1467 45.47 MALSLPLQLIRFPPQPLSSSSQHLLISDLASVSRFFRSPCLSSLAPSRSCTMKLSSRTKCFSMSTEEEQWSESEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQKNSSSSPSDYLSLAIREQVYEVLEVKDDGTVSTRKVNRRQLLKSSGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIRQENPVAKYLFRSFNTQSWRGCYIPVMRMQIVKAAYIIRPCANIGTITQFGL 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24094802 24104240 + CrPI670011_01g011870.1 Cre01g1187 488732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1187 488 CDD Mrs2_Mfm1p-like 129 436 IPR039204 -
Cre01g1187 488 Gene3D - 119 203 - -
Cre01g1187 488 Coils Coil 336 356 - -
Cre01g1187 488 FunFam Magnesium transporter MRS2-11, chloroplastic 205 387 - -
Cre01g1187 488 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 104 436 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cre01g1187 488 FunFam Magnesium transporter MRS2-11, chloroplastic 122 203 - -
Cre01g1187 488 Pfam Magnesium transporter MRS2-like 132 386 - -
Cre01g1187 488 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1187 K16075 - csv:101219314 709.909