Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1429 ATGAGAACTTCCGTCCCTCTCTTCCTCTTCTCGTTCTCCTTCACAATCGCGTGGTTTGATCTTCAGCTCTGTTTCAGCAATGACGCCAACGATGAATTTAAAGCTTGCGGTGTGTATTACAACTGGGGAAATTTGGTTAACATCTCATATCCGTTCTGGGGGAATGAGCGGAGGGAATTTTGCGGTCGGCGAGAATTTGAACTCAATTGCAAAGACAACAAAACCACAACGATTCAAATCAATTCTATCGAATATAACGTTCTGAAAATCAACCAATCGGATAATAGAATGACGATCGCAAGATCAGATCTCTTCGACGATTACTGTCCTAAAAATCAAATCGAAACGGCGACGTTGGATCATAGTCTGTTCAAGTATTTTTCGAACGATCTAAATCTGTGGGTGTGGTATGATTGCCCGCCGCAACAGGGGATTCCGGAGGAGTTCATGTTTTCGTGTGGTTGGAACGGGGAACGAAGTGGAAGAGCGAATTATGCTTTGGAGAAGAAGGATGCGATGAATTGGAGTAAAAATATTAGCGGGTGTAAGATGAACATGGAAGTGACGATTACGATGGAGGTATTGAAAGAAGGAGAAAAGAACAGAACAATGGTGGTGGAAAAGGGAATGAAAGAAGGGTTTGAAGTGGAATACGGGGATTTCTACGCCATAGCTTGCGACGGATGCAAGGAATCTGGTGGCGCGTGTGGTGGAAACGCGACTCAACAGTTTCTGTGCATTTGTGGGAGTGGAGATGTACATCCTTACGTTTGCAAAGGAGCCCCCCCTCCTGGAGGACTGTATGTACATGAATGGAAGCAGGCCACTCTAGGATTTCCATATAAAAATGGTAGAAGGAAGCCGGACATTATTATAGGAGCAACAACTTCAGCCGGCTTCATTTTAATAATCTCCATTATCATCTTCATCTACTGCAAGAGAAAAAGAATCTCAAACAAAGACAAAATCGAGGAAATTATTAAGAGATATTCCACACAGACACCCAAGCGATACAGTTACTCCAAGTTAAAGAAGATCACAGATTCCTTCAAGAACAAACTTGGCCAAGGAGGATTTAGCATTGTGTACAAAGGAAAGCTACCAAGTGGATGTGATGTGGCTGTGAAACTTTTAAATGAATCCAGACAAGAAAATGGCCAAGATTTCATCAATGAAGTTGTTAGCATAGCCAAAACTTCGCACGTAAACATAGTCACCCTCTTAGGTTTCTGCTACGAGCAGAACAAGAGGGCTTTGGTTTATGAATATATGCCTAAGGGGTCATTGGATAAGTACATATCCCACAACAGACTGCAAGAAAATGATATGAAATTGGATTGGAACACACTCTACAATGTTGTTATTGGTGTGGCACGAGGCTTAGAGTACTTGCATCGCGGTTGCATCACAAGGATTTTGCACTTTGACATCAAACCACACAACATACTTTTGGATGATGACTTCTGCCCCAAAATCTCAGATTTTGGGCTTGCCAAGCAATGCAGGCCCAAAGAAACTCATGTATCGATGACAGGTGTGAAAGGGACGGTAGGATTCATTGCACCCGAAGTAATATTCAGGAACTTTGGTAAGGTTTCTCACAAGTCTGATGTTTATAGCTATGGAATGTTGGTTCTTGAAATGGTGGGAGCAAGAAAGAACCCCAATTCCAATGACAGGGATGGAGTGGAGCAGGGCAGTGAAGAGTACTTTCCTGATTGGATATATAAAAATCTTACACAAAGTGAAATAGATGGAGGGTGTTGCTGGGGAAGCACAGAGGAAGAAGAAGAAATGACAAGAAAAATGATGATTGTGGGTTTACATTGTATTCAGACATTGCCCGACGACAGGCCGTCGATGACCGATGTGGTTGCTATGTTGGAAGGCAGTGTTGATGGCTTACAGATTCCACCAAAACCCAACTTGTTTGGACCTGCAACCATTGAGCATCCCCAACCTTCTTCTTCCTCTTCATCCAATTGA 1986 42.85 MRTSVPLFLFSFSFTIAWFDLQLCFSNDANDEFKACGVYYNWGNLVNISYPFWGNERREFCGRREFELNCKDNKTTTIQINSIEYNVLKINQSDNRMTIARSDLFDDYCPKNQIETATLDHSLFKYFSNDLNLWVWYDCPPQQGIPEEFMFSCGWNGERSGRANYALEKKDAMNWSKNISGCKMNMEVTITMEVLKEGEKNRTMVVEKGMKEGFEVEYGDFYAIACDGCKESGGACGGNATQQFLCICGSGDVHPYVCKGAPPPGGLYVHEWKQATLGFPYKNGRRKPDIIIGATTSAGFILIISIIIFIYCKRKRISNKDKIEEIIKRYSTQTPKRYSYSKLKKITDSFKNKLGQGGFSIVYKGKLPSGCDVAVKLLNESRQENGQDFINEVVSIAKTSHVNIVTLLGFCYEQNKRALVYEYMPKGSLDKYISHNRLQENDMKLDWNTLYNVVIGVARGLEYLHRGCITRILHFDIKPHNILLDDDFCPKISDFGLAKQCRPKETHVSMTGVKGTVGFIAPEVIFRNFGKVSHKSDVYSYGMLVLEMVGARKNPNSNDRDGVEQGSEEYFPDWIYKNLTQSEIDGGCCWGSTEEEEEMTRKMMIVGLHCIQTLPDDRPSMTDVVAMLEGSVDGLQIPPKPNLFGPATIEHPQPSSSSSSN 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27526495 27532432 + CrPI670011_01g014290.1 Cre01g1429 488974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1429 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre01g1429 661 PANTHER RUST RESISTANCE KINASE LR10-RELATED 214 646 IPR045874 GO:0004672(InterPro)
Cre01g1429 661 MobiDBLite consensus disorder prediction 637 661 - -
Cre01g1429 661 FunFam S-receptor-like serine/threonine-protein kinase 316 423 - -
Cre01g1429 661 Pfam Wall-associated receptor kinase galacturonan-binding 43 101 IPR025287 GO:0030247(InterPro)
Cre01g1429 661 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
Cre01g1429 661 Pfam Protein tyrosine and serine/threonine kinase 350 628 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre01g1429 661 Pfam Wall-associated receptor kinase C-terminal 169 250 IPR032872 -
Cre01g1429 661 SUPERFAMILY Protein kinase-like (PK-like) 336 652 IPR011009 -
Cre01g1429 661 ProSiteProfiles Protein kinase domain profile. 348 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre01g1429 661 SMART serkin_6 348 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre01g1429 661 FunFam PR5-like receptor kinase 424 640 - -
Cre01g1429 661 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524(InterPro)
Cre01g1429 661 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1429 Cre-Chr1:27526495 Cre01g1434 Cre-Chr1:27546065 0.00E+00 dispersed
Cre01g1429 Cre-Chr1:27526495 Cre01g1431 Cre-Chr1:27537841 3.80E-30 proximal
Cre01g1428 Cre-Chr1:27518041 Cre01g1429 Cre-Chr1:27526495 7.40E-158 tandem
Cre01g1429 Cre-Chr1:27526495 Cre01g1430 Cre-Chr1:27533350 2.00E-187 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63830 PF07714 PK_Tyr_Ser-Thr 2.40E-48 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1429 - - - 0.0