Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1475 ATGTCTTCTCTCCCATTTGCTTTCTTCTTCCTCCTCCTCTCCTTCCATTTCTTCTCGGCAATTAGCATCGATTTCCTCGTCGGCGATGAGGATGGCTGGGCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATATCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCGGTGATGATGGTGACAGAGGAAGAGTACAAACAGTGTTTTTCTTCAAAGCCTCTGTTTTATGAGAACAATGGTGATAGTGTTGTGAAACTTGATAGAGCCGGTTTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGCCAAAGAATGATAATCAAAGTGTTGGAACCTATAAATCCTCCTCACCCACCAACTGCTCCACCAAATAACAAGAATGCTGCAGCAGCCTCTTCTAATTTGCTCTCTGTTTCATCTTCAATCTTGGGAGTGTTCTTGATGTTGTTCTTTGCTCTGTTTCTGTCCATTTGA 516 42.25 MSSLPFAFFFLLLSFHFFSAISIDFLVGDEDGWAVPKPKEADKYNKWASHNRFNIDDTVHFKYEKDSVMMVTEEEYKQCFSSKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPINPPHPPTAPPNNKNAAAASSNLLSVSSSILGVFLMLFFALFLSI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27973521 27974141 + CrPI670011_01g014750.1 Cre01g1475 489020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1475 171 Gene3D - 22 126 IPR008972 -
Cre01g1475 171 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055(InterPro)
Cre01g1475 171 PANTHER BLUE COPPER PROTEIN 16 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cre01g1475 171 Pfam Plastocyanin-like domain 40 117 IPR003245 GO:0009055(InterPro)
Cre01g1475 171 CDD OsENODL1_like 24 124 IPR041846 -
Cre01g1475 171 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Cre01g1475 171 FunFam Early nodulin-like protein 1 22 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0506 Cre-Chr1:4367174 Cre01g1475 Cre-Chr1:27973521 1.00E-31 dispersed
Cre01g1475 Cre-Chr1:27973521 Cre09g0002 Cre-Chr9:350521 3.80E-26 dispersed
Cre01g1475 Cre-Chr1:27973521 Cre06g1355 Cre-Chr6:7661666 4.10E-12 transposed
Cre01g1475 Cre-Chr1:27973521 Cre09g0274 Cre-Chr9:2766462 4.10E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1475 - - - 0.0