Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre01g1520 | ATGTTGTTTCAGATTCCCCGACTGACCAGCTCCCTCAGGGAGCCATTCGATGTCGACCAGGCGTATCTCCATCGCAAGCTCCTTCTTCAAAATCACAAACCGTCCCACTCCATAGCTTCATCGGGCGAGTCAGAACTAGCGCGGAAGATAGTGTATCAATGGGATGAAGGTACAGATTTTTGTTACTTAGCATCTTTGTGTAAATTTGGTCGTGAATCTGTAGAGTGCTTATCTTCTCATGATGTTCTCTCTTTTATGGAAATTGGTGGAGCAGCATCCTTTGAAGTTCGACAAGCCTATAAGCAGTTCATTGCGGGAGTTGTTGGGTTGGTGGACAGAGAAGTACCATCCGAGGAGCTTGGTGAGGTAGCACTGACTATTTATTGCCTTTTTGGCGAGCGAAAAGAAGAGAATGATCTCGACTATATTGCTAAAAACATGGAAGAATTGCAAAAGCTTATTGGCAATACAGTTTCAGATGCTAGGCTGCAGAAAGTTATTTCTCTAGCTCAGAAACTATTTATTTTGCAGCCAAGGGATCATGCAACTGCATTGCTAGCAGAGAAGCATGTTAACAAGGGTGACTCCTCTGTAGAGTTTGGCGCTGATCTTGCTTTTAGAGAACCTACTAGGTTTATGGTGGATGCGTCTCTGGAAAATTCAGATTTACTGGGCAAGGATATTACTGCACCTACATTTTATGACAGACAACATGTGCAAGACCATTCCATGAACTTTGATCTCTCTAATGAAAGAGGAAAGTTAAATTTGAGTTGGTTGAGGGATGCATGTGACGAGATAACAAGAAAAAGTACCTCACAACTCTCCCTTGACGAGCTTGCAATGGCCATTTGCCGAGTCCTTCATTCAGAAAAACCTGGCGAGGAGATAGCTGCAGATCTATTGGATCTTGTTGGTGATGGAGCATTTGAGTTTGTTCAAGATCTTATTTCACACCGAAGGGAACTTGTTGATGATATTCATCATGGGTTAACAATAATAAAATCTGAAAAACCAAATTCAAGCTCACAATCACGAATGCCTAGCTATGGAACTCAGGTTACTGTTCAAACAGAATCAGAGAAACAAATTGATAAGCTTCGACGTAAGGAGGAAAAGAGAAATAAACGAGGAATTGAATATGATTCTGAAAGTGATTTCTCTGCTATAAGCTTTTCTTCTCTAGTTCAAGCAAGCCAAAGGAAAAGTCCATTTGACGATCTTATTGGTTCTGGTGAGGGCTCTAACTCCCTTACAGTTAGTGCACTTCCTCAAGGAACACAAAGGAAGCATTTTAAGGGATATGAGGAGGTAATTATCCCTCCAATCCCAGCAGCACAAATGAAACCTGGTGAAAAGCTGATTGAAATAAAGGAGTTGGATGATTTTGCTCAAGCTGCTTTTCGCGGATTTAAATACTTAAACCGCATACAGAGTCGCATTTTTGACACTGTTTATAACACCAATGAGAATATACTAGTCTGTGCTCCAACAGGGGCTGGGAAAACTAATATAGCGATGATCTCCATTCTCCATGAGATTTCACAGCACTTCAAGGATGGATATTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCTATGAAGGCATTGGCTGCAGAGGTCACATCTACTTTTAGCCATCGTTTATCACCCTTGAATGTTACTGTAAGAGAACTAACTGGAGACATGCAACTTTCAAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACTCGAAAAAGCAGTGACATGTCACTGTCGATGTTAGTCAAACTCTTAATTATTGACGAGGTGCATCTTCTAAATGATGACCGAGGGCCTGTAATTGAGGCATTAGTTGCACGAACTCTTCGTCAGGTGGAGTCAACACAAACAATGATACGGATTGTTGGCCTTTCAGCCACCCTCCCTAATTACTTAGAGGTTGCACAGTTTCTTAGAGTGAATCCAGGAACAGGACTTTTCTTCTTTGATTCTAGCTACCGTCCTGTGCCTCTTGCACAACAATATATTGGTATCAGCGAGCATAACTTTGCAGCTCGCAATGAATTGTTAAATGAAATATGCTATAAGAAGGTTGTTGATTCATTAAAGCATGGGCATCAAGCAATGGTGTTTGTTCATTCTCGAAAGGACACAGCAAAGACAGCAGAGAAACTGGTCGAAATTGGTCGGAAGTATGATGATCTTGAGGTATTTAAGAATGATGCACACCCGCAATTTGGTATTATCAAGAAAGAAGTCATCAAATCCAGGAATAAAGATCTAGTAGAACTTTTTAATTTTGGGATTGGTGTACATCATGCTGGAATGCTACGTTCTGATAGAGGTTTAACCGAAAGGCTTTTCTCTGATGGACTATTGAAGGTTCTTGTTTGTACAGCCACCTTAGCATGGGGTGTAAATCTGCCTGCTCATACGGTTGTTATAAAGGGCACCCAATTATATGATCCAAAAGCTGGTGGATGGCGAGATTTGGGTATGCTTGATGTCATGCAGATTTTTGGACGAGCTGGGAGACCTCAGTTTGACAAAAGTGGTGAAGGCATCATAATTACATCTCACGATAAACTTGCCCATTATTTGCGATTGCTTACAAGTCAGCTCCCTATAGAGAGTCAGTTTATTGGTTCTTTGAAAGATAATTTGAATGCGGAGGTTGCACTGGGTACTGTAACAAATGTGAAGGAAGCTTGTGCCTGGCTTGGATATACATATCTATTTATAAGGATGAGACTAAATCCGCTGGCATATGGCATTGGATGGGATGAGGTCATGGCCGATCCATCTTTGAGTTCAAAGCAAAGAGCTCTCATAACAGATGCTGCACGTGCACTCGACAAATCAAAGATGATGCGTTTTGATGAAAAAAGTGGCAACTTTTATTGTACAGAGCTCGGCCGCATTGCCAGCCACTTCTATATTCAGTATTCCAGTGTTGAAACATATAATGAGATGTTGAGACGTCATATGAATGACAGTGAGATTATTGACATGGTCGCTCATTCTTCTGAGTTTGAAAATATTGTTGTTCGAGATGAGGAGCAGAGTGAGCTGGAGATGTCAGTACGAACATCATGTCCCTTGGAAGTTAAAGGTGGCCCATCCAATAAACATGGAAAAATTTCCATCCTTATTCAGTTGTACATTTCCAGAGGTTCCATCGATACCTTCTCATTAGTCTCCGATGCTGCTTATATAAGTGCTAGCTTGGCTCGTATTATGCGAGCTCTATTTGAAATATGTTTGAGAAGGGGTTGGTGCGAAATGACTTTGTTCATGTTGGAATACTGCAAAGCTGTTGATCGTCGAATATGGCCACACCAGCATCCTCTAAGACAATTTGACAAGGATCTTTCTTCAGATATATTGCGCAAGCTTGAGGAGCGAGAGGCTGATTTGGATCGTCTACAGGAGATGCAGGAAAAAGACATAGGAGCATTGATCCGTTATGCACCTGGTGGAAGATTGGTTAAGCAGTATTTAGGATATTTTCCACTAATCCAGTTATCAGCAACTGTCAGCCCAATAACAAGAACAGTCCTAAAGGTTGAGGTGGTCATAACAGCCGACTTCATATGGAAAGATCGTTTTCATGGAGGTTCACAACGCTGGTGGATACTAGTTGAGGATAACGAGAATGACCATATTTATCACTCCGAGCTTTTCACTCTGGCAAAGAAGAAGGCTAGAGAGCCTCAAAGGCTTTCCTTCACAGTCCCAATATTTGAGCCACATCCTCCTCAATATTATATTCATGCCGTTTCTGACTCCTGGCTGCAAGCAGAAGCATTTTACACCATATCTTTCCAAAATTTAGCACTGCCGGAGGCCCGTACGTCGCACACTGAGCTCCTAGACTTGAAACCTCTTCCAATAACTGCTCTTGGTAACAGAAGTTACGAATCCCTGTATAAATTTTCACATTTTAATCCAATACAAACACAGATTTTTCATGTGTTGTACCATACAGATGATAACATTCTGTTGGGTGCTCCCACTGGGAGTGGAAAAACCATATCTGCTGAACTTGCTATGCTTCGTCTCTTCAATACTCAGCCTGATATGAAGGTTGTCTACATAGCACCTTTGAAGGCCATTGTTCGTGAAAGAATGAATGACTGGAAAAATTGTCTTGTTTCTCGGCTCGGCAAAAAAATGGTTGAAATGACGGGAGATTATACCCCTGATTTGATGGCACTTTTGTCAGCAGATATTATAATATCAACCCCCGAAAAGTGGGATGGTATTAGTAGAAATTGGCATAGTCGAAGCTATGTTACAAAGGTTGGACTAATGATTCTGGATGAGATCCATTTATTGGGAGCAGATCGTGGTCCCATTCTTGAGGTTATTGTTTCAAGGATGAGGTATATATCATCACAGACTGAGCGAAAAGTTAGATTTGTAGGCCTTTCAACTGCTTTAGCGAATGCAAGTGATTTGGGTGACTGGCTAGGTGTTGGAGAAAATGGACTTTTCAATTTCAAACCAAGCGTAAGGCCAGTGCCTCTTGAAGTTCATATTCAGGGATATCCTGGAAAGTTCTACTGCCCTAGGATGAACAGTATGAATAAACCAACTTATGCTGCCATCTGCACCCATTCACCAACCAAGCCAGTTCTTATATTCGTCTCATCTCGTCGCCAGACAAGACTCACGGCATTGGATCTTATTCAGTTTGCAGCTTCAGATGAGCATCCAAGGCAATTTCTTAATATGACCGAAGAAGAGCTTCAGATGATCCTTTGTCAAGTCATTGATCAAAATCTCAGGCACACTTTGCAGTTTGGTATCGGGCTACACCATGCAGGTCTAAATGATGGCGACAGATCTATGGTTGAGGAACTGTTTGCAAACAACAAAATTCAGGTATTGGTTTGTACTAGCACATTGGCTTGGGGTGTGAACCTTCCTGCACATCTAGTTATTATCAAGGGAACAGAATATTATGATGGAAAATCAAAGAGATACGTTGATTTTCCAATCACAGATATTCTGCAAATGATGGGTCGTGCAGGTCGACCACAGTATGATCAACATGGAAAAGCAGTTATTCTTGTTCATGAACCCAAAAAGAGCTTTTATAAGAAGTTTTTGTACGAACCATTCCCAGTTGAGAGTAGTCTCAAGGAGCAGTTGCATGACCATATCAATGCTGAGATAGTTTCGGGCACCATTTGTCATAAAGAGGATGCAGTACACTATCTTAGCTGGACATATTTGTTTCGTAGGCTGATGGTAAATCCTGCTTACTATGGGTTGGATAGCATGGAACCTGAAATTCTAAGTTCGTACTTATCTAGGTTAGTACAAAGCACATTTGAGGATCTCGAGGATAGTGGATGCATAAAGATGGATGAAGACAGAGTGGAGCCAATGATGCTGGGCTCAATAGCATCTCAGTATTACCTCAGCTACATTACTTTATCAATGTTTGGCTCAAATATAGGTCCAGATACGTCACTTGAAGTATTTTTGCATATCCTTTCCGCCGCTTCTGAATATGATGAACTTCCTGTGCGGCATAATGAGGAAAATTACAATGCTGCTCTATCTGAGAGGGTTCGATATAAGGTGGACAAAGATCGACTTGATGATCCACATGTGAAGGCAAATTTACTTTTTCAGGCACACTTTTCTCAGTTGGAATTACCAATCAGTGACTACATTACCGACTTAAAGTCAGTGTTGGATCAGAGTATACGCATTATTCAGGCCATGATTGATATATGTGCCAACAGTGGATGGCTATCAAGCTCGATTACATGCATGCGTCTATTGCAAATGGTCATGCAGGGCTTGTGGTTTGATGTGGATTCGGCATTATGGATGCTACCATGCATGAATGATGACCTTGCAAATTCACTTAAAAAATCGGGATATCTAACTCTGCAGCAACTGTTGAATCTTCCCAAGACAGCTTTGCAAAATTTGATTGGAAATTTTCCTGCTTCAAAATTAACTCAGGATTTGCAGATTTTTCCTCGTGTCCAAATGAAGATAAAATTTCAAAGGAAGGATGATGACGTTGGAAAAGCTCCCTCTCTTAACATTAGATTGGAGAAGATAAGTTCGAGGAAAAACAGAACCAGGGCATATGCACCACGGTTTCCCAAGATGAAAGATGAAGCATGGTGGCTTGTACTTGGTAACACCTCTACGTCGGAACTGTATGCTTTAAAGAGAGTTTCTTTTTCTGATCGCTTGGTCACAACCATGCAGTTGCCTCCAAAAAGAAATGACTTCCAGGAAATGAAATTGATTTTGGTCTCAGATTGTTATCTTGGTTATGAGCAAGAATACTCCATTAAAGAACTGATAAGTGGAAGCAGTTGA | 6372 | 41.07 | MLFQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPSHSIASSGESELARKIVYQWDEGTDFCYLASLCKFGRESVECLSSHDVLSFMEIGGAASFEVRQAYKQFIAGVVGLVDREVPSEELGEVALTIYCLFGERKEENDLDYIAKNMEELQKLIGNTVSDARLQKVISLAQKLFILQPRDHATALLAEKHVNKGDSSVEFGADLAFREPTRFMVDASLENSDLLGKDITAPTFYDRQHVQDHSMNFDLSNERGKLNLSWLRDACDEITRKSTSQLSLDELAMAICRVLHSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVDDIHHGLTIIKSEKPNSSSQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNKRGIEYDSESDFSAISFSSLVQASQRKSPFDDLIGSGEGSNSLTVSALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLIEIKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLEVFKNDAHPQFGIIKKEVIKSRNKDLVELFNFGIGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLLTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRIWPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGYFPLIQLSATVSPITRTVLKVEVVITADFIWKDRFHGGSQRWWILVEDNENDHIYHSELFTLAKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEARTSHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHTDDNILLGAPTGSGKTISAELAMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMTEEELQMILCQVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSSYLSRLVQSTFEDLEDSGCIKMDEDRVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSLEVFLHILSAASEYDELPVRHNEENYNAALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWMLPCMNDDLANSLKKSGYLTLQQLLNLPKTALQNLIGNFPASKLTQDLQIFPRVQMKIKFQRKDDDVGKAPSLNIRLEKISSRKNRTRAYAPRFPKMKDEAWWLVLGNTSTSELYALKRVSFSDRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSIKELISGSS | 2123 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 28397679 | 28435919 | + | CrPI670011_01g015200.1 | Cre01g1520 | 489065 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre01g1520 | 2123 | Gene3D | - | 1513 | 1717 | IPR027417 | - | |
| Cre01g1520 | 2123 | MobiDBLite | consensus disorder prediction | 335 | 360 | - | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | Winged helix DNA-binding domain | 881 | 986 | IPR036390 | - | |
| Cre01g1520 | 2123 | CDD | DEXHc_ASCC3_2 | 1320 | 1508 | - | - | |
| Cre01g1520 | 2123 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 700 | 898 | IPR001650 | - | |
| Cre01g1520 | 2123 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1330 | 1505 | IPR014001 | - | |
| Cre01g1520 | 2123 | Coils | Coil | 1131 | 1155 | - | - | |
| Cre01g1520 | 2123 | Gene3D | - | 1718 | 1811 | IPR036388 | - | |
| Cre01g1520 | 2123 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1537 | 1745 | IPR001650 | - | |
| Cre01g1520 | 2123 | Pfam | DEAD/DEAH box helicase | 475 | 649 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
| Cre01g1520 | 2123 | Gene3D | - | 462 | 673 | IPR027417 | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | Sec63 N-terminal domain-like | 1002 | 1177 | - | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1507 | 1716 | IPR027417 | - | |
| Cre01g1520 | 2123 | PIRSF | BRR2 | 87 | 2122 | - | - | |
| Cre01g1520 | 2123 | Gene3D | - | 1812 | 1948 | - | - | |
| Cre01g1520 | 2123 | SMART | ultradead3 | 1317 | 1521 | IPR014001 | - | |
| Cre01g1520 | 2123 | SMART | ultradead3 | 470 | 681 | IPR014001 | - | |
| Cre01g1520 | 2123 | FunFam | U5 small nuclear ribonucleoprotein helicase | 975 | 1117 | - | - | |
| Cre01g1520 | 2123 | Pfam | DEAD/DEAH box helicase | 1322 | 1488 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
| Cre01g1520 | 2123 | SUPERFAMILY | E set domains | 2003 | 2116 | IPR014756 | - | |
| Cre01g1520 | 2123 | FunFam | RNA helicase, activating signal cointegrator 1 | 1176 | 1284 | - | - | |
| Cre01g1520 | 2123 | Gene3D | - | 1119 | 1173 | - | - | |
| Cre01g1520 | 2123 | Gene3D | C2 domain | 2005 | 2119 | IPR035892 | - | |
| Cre01g1520 | 2123 | SMART | Sec63_2 | 1804 | 2117 | IPR004179 | - | |
| Cre01g1520 | 2123 | SMART | Sec63_2 | 974 | 1281 | IPR004179 | - | |
| Cre01g1520 | 2123 | Gene3D | - | 674 | 876 | IPR027417 | - | |
| Cre01g1520 | 2123 | FunFam | Activating signal cointegrator 1 complex subunit 3 | 1513 | 1717 | - | - | |
| Cre01g1520 | 2123 | Pfam | Sec63 Brl domain | 974 | 1280 | IPR004179 | - | |
| Cre01g1520 | 2123 | FunFam | U5 small nuclear ribonucleoprotein helicase | 674 | 876 | - | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | Winged helix DNA-binding domain | 1716 | 1816 | IPR036390 | - | |
| Cre01g1520 | 2123 | SMART | helicmild6 | 761 | 853 | IPR001650 | - | |
| Cre01g1520 | 2123 | SMART | helicmild6 | 1596 | 1688 | IPR001650 | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 668 | 881 | IPR027417 | - | |
| Cre01g1520 | 2123 | Pfam | Sec63 Brl domain | 1804 | 2115 | IPR004179 | - | |
| Cre01g1520 | 2123 | FunFam | DExH-box ATP-dependent RNA helicase DExH14 | 2007 | 2117 | - | - | |
| Cre01g1520 | 2123 | FunFam | Activating signal cointegrator 1 complex subunit | 1285 | 1512 | - | - | |
| Cre01g1520 | 2123 | MobiDBLite | consensus disorder prediction | 361 | 377 | - | - | |
| Cre01g1520 | 2123 | FunFam | U5 small nuclear ribonucleoprotein helicase | 1718 | 1811 | - | - | |
| Cre01g1520 | 2123 | FunFam | RNA helicase, activating signal cointegrator 1 | 462 | 673 | - | - | |
| Cre01g1520 | 2123 | Pfam | Helicase conserved C-terminal domain | 766 | 852 | IPR001650 | - | |
| Cre01g1520 | 2123 | Pfam | Helicase conserved C-terminal domain | 1597 | 1687 | IPR001650 | - | |
| Cre01g1520 | 2123 | FunFam | Activating signal cointegrator 1 complex subunit 3 | 1811 | 1947 | - | - | |
| Cre01g1520 | 2123 | FunFam | U5 small nuclear ribonucleoprotein helicase | 883 | 974 | - | - | |
| Cre01g1520 | 2123 | Gene3D | C2 domain | 1176 | 1284 | IPR035892 | - | |
| Cre01g1520 | 2123 | CDD | SF2_C_Ski2 | 1512 | 1700 | - | - | |
| Cre01g1520 | 2123 | PANTHER | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED | 255 | 1201 | IPR050474 | - | |
| Cre01g1520 | 2123 | SMART | AAA_5 | 488 | 805 | IPR003593 | GO:0016887(InterPro) | |
| Cre01g1520 | 2123 | SMART | AAA_5 | 1335 | 1485 | IPR003593 | GO:0016887(InterPro) | |
| Cre01g1520 | 2123 | SUPERFAMILY | Sec63 N-terminal domain-like | 1837 | 1993 | - | - | |
| Cre01g1520 | 2123 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 483 | 665 | IPR014001 | - | |
| Cre01g1520 | 2123 | Gene3D | - | 975 | 1117 | - | - | |
| Cre01g1520 | 2123 | MobiDBLite | consensus disorder prediction | 335 | 377 | - | - | |
| Cre01g1520 | 2123 | CDD | DEXHc_ASCC3_1 | 474 | 669 | - | - | |
| Cre01g1520 | 2123 | Gene3D | - | 1285 | 1512 | IPR027417 | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1208 | 1505 | IPR027417 | - | |
| Cre01g1520 | 2123 | FunFam | U5 small nuclear ribonucleoprotein helicase | 1118 | 1174 | - | - | |
| Cre01g1520 | 2123 | Gene3D | - | 883 | 973 | IPR036388 | - | |
| Cre01g1520 | 2123 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 435 | 658 | IPR027417 | - | |
| Cre01g1520 | 2123 | CDD | SF2_C_Ski2 | 673 | 864 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre01g1520 | K18663 | - | - | csv:101222457 | 4011.84 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre01g0541 | Cre-Chr1:4684624 | Cre01g1520 | Cre-Chr1:28397679 | 2.70E-81 | dispersed | |
| Cre01g1520 | Cre-Chr1:28397679 | Cre05g1467 | Cre-Chr5:18631600 | 0.00E+00 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi17g647 | . | Blo16g00171 | . | . | . | Bpe13g00309 | Bma06g00154 | . | Cmo13g01125 | . | . | . | . | . | . | Cpe20g00069 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone2ag0807 | . | . | . | Lsi02g00115 | Csa01g00593 | Chy12g01505 | Cme12g01949 | . | . | Bda11g01720 | . | . | . | . | . | . | . | . | Cma13g01078 | . | Car13g00915 | . | . | . | Bhi08g01095 | . | . | . | . | . | . | Cla04g01159 | Cam04g1218 | Cec01g1729 | Cco01g1775 | Clacu04g1245 | Cmu04g1224 | Cre01g1520 | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0009577 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 32 |