Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre01g1543 ATGAACCGTACATTCAATTCATACCCAGATGAAAATTATGCAAATGTTAGGAGATTGATGAGGCAGACTGAGGATGATGATCACAAGAACCTATTGGACAAGGATTCGCACTGTGATTTGAAGAGCAACCACGAATTGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTTTGATGATGTTCATTTCTGTGATATTTTCGGTCTCTGTGGTTCTTAGAGATCCACCATCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCTGACCCAGTAGAATCTAAGGTTGGAGATCTTCCTACGGTTATACAGCCAGTTGATAAACTGCTTAGTGGTCTTCTTTCTGCCAAACATGGGGTTGATTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTTACGAACCCTCTTCTTACTTAATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTTCATACTGAATCTTACAACAAAACTTTGGAGCAGCTAAAGTCTAACGGCAGTAGCAGCTCCTCGGATTGTAAATATGTTGTTTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTCGCTTCGACGTTTCTTTATGCTCTCCTCACAAATCGTGTTCTTCTTGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTCCCATTAACAGATGAGTTCAGCAAATTCAACCAGAATTCTACTAATTGCTATGGGAAAATAATGAAGAATAGCATGACCCCAGATTCAAGTGGAATGATCTTGCCAGCTGTAGTTTATCTTCATTTGGTCCATGATTATGATGCTGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTCCCATCTCTCTTTTTGATCCCATCATTTGAGAAAGAACTTAATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCCGTGAATTCGGTTTGGGGTCTGATTACAAGATATTATCAGGCGTACTTGGCTAGAGCTAGCGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGGACTGGACCTTTTCAACACATCCTGGATCAGGTTCTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACCGAGAGGCAAACGAATGTTGTTGCTCCAGCTAGTAATCAAAAGTCAAAGGCTGTGCTGATAACTTCCTTGAGCGCTGGTTACTTCGAGAAGTTGAGAGATATTTACTGGGAGAATCCGACGGTAACGGGAGAGAGAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACGGAGAAAAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACCAGTTCATGGTCGACCTTCGGATATGTGGCTCAGGGTCTTGGGGGTCTGAAACCATGGATATTGTACAAACCTGAAAATCGTACTGCGCCCGATCCACCTTGCCGTCGAGCCCTGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGACTTAAGTTGGTTGATCAATATGATTGA 1758 42.61 MNRTFNSYPDENYANVRRLMRQTEDDDHKNLLDKDSHCDLKSNHELKCGFSSIRVMGMFVVLMMFISVIFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPVESKVGDLPTVIQPVDKLLSGLLSAKHGVDSCLSRYNSVAYQHKLAYEPSSYLISKLRSYEDLHKRCGVHTESYNKTLEQLKSNGSSSSSDCKYVVWISFSGLGNRILTLASTFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLTDEFSKFNQNSTNCYGKIMKNSMTPDSSGMILPAVVYLHLVHDYDADDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERQTNVVAPASNQKSKAVLITSLSAGYFEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRALSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQYD 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28633401 28635915 + CrPI670011_01g015430.1 Cre01g1543 489088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre01g1543 585 Gene3D - 188 242 - -
Cre01g1543 585 Gene3D - 368 529 - -
Cre01g1543 585 Pfam Xyloglucan fucosyltransferase 110 554 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cre01g1543 585 PANTHER FUCOSYLTRANSFERASE 2-RELATED 50 583 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cre01g1543 585 FunFam Galactoside 2-alpha-L-fucosyltransferase 189 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1543 Cre-Chr1:28633401 Cre07g1442 Cre-Chr7:29480329 5.30E-144 dispersed
Cre01g1543 Cre-Chr1:28633401 Cre05g2576 Cre-Chr5:36970373 4.60E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre01g1543 K13681 - csv:101219153 1099.35