Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0370 | ATGGAAAATGGTTTCGACGGGAGATCATTGGCCGAAAAATTCTCTGAGTTGGGCGTCAGTGCTACTCCAGCAGAGCAATCTAACTCCCACTCATCCAACAATCACGGTAACAACAACGACAGCAACTTGTTTCAGGTTTTGAAAGCTGTTGAAGCAGCTGAGGCTACCATTAAGCAACAGATGGAGGAAAATAGTCGACTGAGGATTGAACTTCAGAAAAAGATTCAGGAACTTGAGAAATATAATGTTGATGAGCCTTTGGCTCAAAGGTTTCATTCCACAAACCAATGGAATGAGAATGACCATCATGGATCTAATGGGGGTCATCAATCAGATAATTCAGTTGATAACGAACGACGGAGATTTAAGAATAACATTTCTATTGTTGATTCGCATGGAACGTTAGTTCTCCATCAAGGTGTTGAGCAAAAAGATGAAGTACCCATGCGAGTTGATACAGAATCTCGCTTTGAGGACAGCAAGTCAGACAGGATGGTGAATGCTCTTCCCGGTGTTCAGCCTCCAGTTGATAACGCTGGTTGCTCACAGTTCTCTTCACCATCTACGACGTCTTTCTCTGCTAGCAGGTTTACAATGGATGTAGAATATGATCCACGGATTAAGTTGTCTGGACATGGCATAATGCCAAAGGGTGAAGCAAATAATCCCAACAGTCTCTGGAAGCAGGACCTTGTTGTTAAAGTCCAGGAACATGAAGATGAAATTGTGCAGTTACGCAAGCATCTTGCTGATTATTCAATTAAGGAAGCACAAATACGAAATGAAAAATATGTTCTGGAAAAACGTATTGCCTATATGCGTTTGGCCTTTGATCAACAACAACAAGATCTTGTTGATGCTGCTTCTAAAGCTCTCTCATACAGACAAGACATAATTGAGGAAAATATTCGTCTTACATATGCGTTGCAGGAAGCACAACAGGAGAGAACCACCTTTGTGTCATCTCTACTGCCTCTTCTTGCGGAATATTCACTGCAGCCTCCTGTTCCAGACGCTCAGTCCATCATCAGCAATGTCAAGATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGACAAAATTGAAGGAGTCCCAGTATCAATTGGCACCTTGGCGTTCTGATGCAAGCCACTCGAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACCGCTTCAACTAAAAATGGCCTTGAACTGGTTCCTCAACCTTCGTACTGGAATGGAAAGATGCCAGTTTCTTCTTCTGATGCTCAGACTACAGCTGATTGGGATCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGCAAAAAAGTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGTGAGGGAACAAACAAGCAGGTGACATTCCGTGAACCTGTAAGCAATAGTGAGATTGATGACCAGGATGTGGTCCACCAAACAGAGAGAGAAACTATCACCAACTGGAGTTCTGGGCAATCCCCTCCTCCTGCCACTTTTGATGAGCCAAGCTCTTCTCATTCTCCAATTCTGCCTCCAGTCCTCGAGGAACCTTCACCTTCATTTTCTGAAGATGATGATCCATTACCTGGTATTGAGGCCCTTCAAATATCTGGCGAAGCTTTTCCAGGACAAGATCTCCAAGCATGTGGATACTCAATTAATGGAACAACTAGCTGTAATTTTGAGTGGGTACGCCATTTGGAAGATGGATCTGTAAATTACATTGAAGGGGCGAAGCAACCAAACTATCGTGTTACTGCGGATGATGTCGACACCTATCTGGCTATCGAAGTCCAGCCTTTGGATAACAGAAGGCGCAAGGGAGGGCTTGTAAAGGTTTATGCCAATGACCACCGAAAGATAACTTGTGATCCTGAAATGCAGAACCATATAGAGAAGACTCTGTATAGTGGTCATGCATCATATAAAGTATCCATGTCGGCTGGATATCTTGATATATGGGAAGCAGCTACACTGTCCATCAAAAGGGAAGGATACAGTATAAAATGTAGTGGGTCTAGTGGTGATGTCATCACAGAAAAGTTTTCTCCAAATACAATTGTTTCAATTCCATTTGGACAGCCGTATGAGTTTATAATAACTGGTCCGAACAATGTTGAGCATCACTTGCGAGTGGACAGCAATTCTGCTGATATTAGCTGTTTCAGAGATACCATTGTGCTAACCTTGAGATTATTTATTCTAAGGGCTAGCGAGAGAAGAAAAGGAAAAAAGCGAGTTTTGTTCTTTCACAAAGTGTGTGGTTCCACGTCTAGATTGAGATCTGCAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACGTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGACCAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGA | 3045 | 43.51 | MENGFDGRSLAEKFSELGVSATPAEQSNSHSSNNHGNNNDSNLFQVLKAVEAAEATIKQQMEENSRLRIELQKKIQELEKYNVDEPLAQRFHSTNQWNENDHHGSNGGHQSDNSVDNERRRFKNNISIVDSHGTLVLHQGVEQKDEVPMRVDTESRFEDSKSDRMVNALPGVQPPVDNAGCSQFSSPSTTSFSASRFTMDVEYDPRIKLSGHGIMPKGEANNPNSLWKQDLVVKVQEHEDEIVQLRKHLADYSIKEAQIRNEKYVLEKRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQEAQQERTTFVSSLLPLLAEYSLQPPVPDAQSIISNVKILFKHLQEKLLLTETKLKESQYQLAPWRSDASHSSFAPQSPFHSIGATLTASTKNGLELVPQPSYWNGKMPVSSSDAQTTADWDLSTHHQIGLGVGVAKKLEPDDLGRYSHHASSEGTNKQVTFREPVSNSEIDDQDVVHQTERETITNWSSGQSPPPATFDEPSSSHSPILPPVLEEPSPSFSEDDDPLPGIEALQISGEAFPGQDLQACGYSINGTTSCNFEWVRHLEDGSVNYIEGAKQPNYRVTADDVDTYLAIEVQPLDNRRRKGGLVKVYANDHRKITCDPEMQNHIEKTLYSGHASYKVSMSAGYLDIWEAATLSIKREGYSIKCSGSSGDVITEKFSPNTIVSIPFGQPYEFIITGPNNVEHHLRVDSNSADISCFRDTIVLTLRLFILRASERRKGKKRVLFFHKVCGSTSRLRSAGLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV | 1014 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 836283 | 865550 | + | CrPI670011_02g003700.1 | Cre02g0370 | 489651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0370 | 1014 | Gene3D | - | 539 | 617 | - | - | |
Cre02g0370 | 1014 | Coils | Coil | 295 | 315 | - | - | |
Cre02g0370 | 1014 | FunFam | Transmembrane protein | 538 | 619 | - | - | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 96 | 116 | - | - | |
Cre02g0370 | 1014 | PANTHER | EXPRESSED PROTEIN | 10 | 748 | - | - | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 19 | 41 | - | - | |
Cre02g0370 | 1014 | CDD | IF6 | 776 | 992 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cre02g0370 | 1014 | FunFam | Eukaryotic translation initiation factor 6 | 770 | 994 | - | - | |
Cre02g0370 | 1014 | NCBIfam | translation initiation factor IF-6 | 775 | 993 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cre02g0370 | 1014 | Gene3D | - | 772 | 994 | - | - | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 453 | 537 | - | - | |
Cre02g0370 | 1014 | Coils | Coil | 50 | 84 | - | - | |
Cre02g0370 | 1014 | Pfam | eIF-6 family | 775 | 972 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cre02g0370 | 1014 | SUPERFAMILY | Pentein | 775 | 993 | - | - | |
Cre02g0370 | 1014 | Coils | Coil | 228 | 255 | - | - | |
Cre02g0370 | 1014 | SMART | eIF6neu2 | 772 | 973 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 96 | 112 | - | - | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 20 | 41 | - | - | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 459 | 476 | - | - | |
Cre02g0370 | 1014 | Hamap | Translation initiation factor 6 [eif6]. | 761 | 1014 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cre02g0370 | 1014 | MobiDBLite | consensus disorder prediction | 490 | 514 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0370 | Cre-Chr2:836283 | Cre06g2069 | Cre-Chr6:28457668 | 7.60E-122 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0370 | - | - | - | 0.0 |