Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0370 ATGGAAAATGGTTTCGACGGGAGATCATTGGCCGAAAAATTCTCTGAGTTGGGCGTCAGTGCTACTCCAGCAGAGCAATCTAACTCCCACTCATCCAACAATCACGGTAACAACAACGACAGCAACTTGTTTCAGGTTTTGAAAGCTGTTGAAGCAGCTGAGGCTACCATTAAGCAACAGATGGAGGAAAATAGTCGACTGAGGATTGAACTTCAGAAAAAGATTCAGGAACTTGAGAAATATAATGTTGATGAGCCTTTGGCTCAAAGGTTTCATTCCACAAACCAATGGAATGAGAATGACCATCATGGATCTAATGGGGGTCATCAATCAGATAATTCAGTTGATAACGAACGACGGAGATTTAAGAATAACATTTCTATTGTTGATTCGCATGGAACGTTAGTTCTCCATCAAGGTGTTGAGCAAAAAGATGAAGTACCCATGCGAGTTGATACAGAATCTCGCTTTGAGGACAGCAAGTCAGACAGGATGGTGAATGCTCTTCCCGGTGTTCAGCCTCCAGTTGATAACGCTGGTTGCTCACAGTTCTCTTCACCATCTACGACGTCTTTCTCTGCTAGCAGGTTTACAATGGATGTAGAATATGATCCACGGATTAAGTTGTCTGGACATGGCATAATGCCAAAGGGTGAAGCAAATAATCCCAACAGTCTCTGGAAGCAGGACCTTGTTGTTAAAGTCCAGGAACATGAAGATGAAATTGTGCAGTTACGCAAGCATCTTGCTGATTATTCAATTAAGGAAGCACAAATACGAAATGAAAAATATGTTCTGGAAAAACGTATTGCCTATATGCGTTTGGCCTTTGATCAACAACAACAAGATCTTGTTGATGCTGCTTCTAAAGCTCTCTCATACAGACAAGACATAATTGAGGAAAATATTCGTCTTACATATGCGTTGCAGGAAGCACAACAGGAGAGAACCACCTTTGTGTCATCTCTACTGCCTCTTCTTGCGGAATATTCACTGCAGCCTCCTGTTCCAGACGCTCAGTCCATCATCAGCAATGTCAAGATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGACAAAATTGAAGGAGTCCCAGTATCAATTGGCACCTTGGCGTTCTGATGCAAGCCACTCGAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACCGCTTCAACTAAAAATGGCCTTGAACTGGTTCCTCAACCTTCGTACTGGAATGGAAAGATGCCAGTTTCTTCTTCTGATGCTCAGACTACAGCTGATTGGGATCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGCAAAAAAGTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGTGAGGGAACAAACAAGCAGGTGACATTCCGTGAACCTGTAAGCAATAGTGAGATTGATGACCAGGATGTGGTCCACCAAACAGAGAGAGAAACTATCACCAACTGGAGTTCTGGGCAATCCCCTCCTCCTGCCACTTTTGATGAGCCAAGCTCTTCTCATTCTCCAATTCTGCCTCCAGTCCTCGAGGAACCTTCACCTTCATTTTCTGAAGATGATGATCCATTACCTGGTATTGAGGCCCTTCAAATATCTGGCGAAGCTTTTCCAGGACAAGATCTCCAAGCATGTGGATACTCAATTAATGGAACAACTAGCTGTAATTTTGAGTGGGTACGCCATTTGGAAGATGGATCTGTAAATTACATTGAAGGGGCGAAGCAACCAAACTATCGTGTTACTGCGGATGATGTCGACACCTATCTGGCTATCGAAGTCCAGCCTTTGGATAACAGAAGGCGCAAGGGAGGGCTTGTAAAGGTTTATGCCAATGACCACCGAAAGATAACTTGTGATCCTGAAATGCAGAACCATATAGAGAAGACTCTGTATAGTGGTCATGCATCATATAAAGTATCCATGTCGGCTGGATATCTTGATATATGGGAAGCAGCTACACTGTCCATCAAAAGGGAAGGATACAGTATAAAATGTAGTGGGTCTAGTGGTGATGTCATCACAGAAAAGTTTTCTCCAAATACAATTGTTTCAATTCCATTTGGACAGCCGTATGAGTTTATAATAACTGGTCCGAACAATGTTGAGCATCACTTGCGAGTGGACAGCAATTCTGCTGATATTAGCTGTTTCAGAGATACCATTGTGCTAACCTTGAGATTATTTATTCTAAGGGCTAGCGAGAGAAGAAAAGGAAAAAAGCGAGTTTTGTTCTTTCACAAAGTGTGTGGTTCCACGTCTAGATTGAGATCTGCAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACGTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGACCAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGA 3045 43.51 MENGFDGRSLAEKFSELGVSATPAEQSNSHSSNNHGNNNDSNLFQVLKAVEAAEATIKQQMEENSRLRIELQKKIQELEKYNVDEPLAQRFHSTNQWNENDHHGSNGGHQSDNSVDNERRRFKNNISIVDSHGTLVLHQGVEQKDEVPMRVDTESRFEDSKSDRMVNALPGVQPPVDNAGCSQFSSPSTTSFSASRFTMDVEYDPRIKLSGHGIMPKGEANNPNSLWKQDLVVKVQEHEDEIVQLRKHLADYSIKEAQIRNEKYVLEKRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQEAQQERTTFVSSLLPLLAEYSLQPPVPDAQSIISNVKILFKHLQEKLLLTETKLKESQYQLAPWRSDASHSSFAPQSPFHSIGATLTASTKNGLELVPQPSYWNGKMPVSSSDAQTTADWDLSTHHQIGLGVGVAKKLEPDDLGRYSHHASSEGTNKQVTFREPVSNSEIDDQDVVHQTERETITNWSSGQSPPPATFDEPSSSHSPILPPVLEEPSPSFSEDDDPLPGIEALQISGEAFPGQDLQACGYSINGTTSCNFEWVRHLEDGSVNYIEGAKQPNYRVTADDVDTYLAIEVQPLDNRRRKGGLVKVYANDHRKITCDPEMQNHIEKTLYSGHASYKVSMSAGYLDIWEAATLSIKREGYSIKCSGSSGDVITEKFSPNTIVSIPFGQPYEFIITGPNNVEHHLRVDSNSADISCFRDTIVLTLRLFILRASERRKGKKRVLFFHKVCGSTSRLRSAGLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 836283 865550 + CrPI670011_02g003700.1 Cre02g0370 489651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0370 1014 Gene3D - 539 617 - -
Cre02g0370 1014 Coils Coil 295 315 - -
Cre02g0370 1014 FunFam Transmembrane protein 538 619 - -
Cre02g0370 1014 MobiDBLite consensus disorder prediction 96 116 - -
Cre02g0370 1014 PANTHER EXPRESSED PROTEIN 10 748 - -
Cre02g0370 1014 MobiDBLite consensus disorder prediction 19 41 - -
Cre02g0370 1014 CDD IF6 776 992 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre02g0370 1014 FunFam Eukaryotic translation initiation factor 6 770 994 - -
Cre02g0370 1014 NCBIfam translation initiation factor IF-6 775 993 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre02g0370 1014 Gene3D - 772 994 - -
Cre02g0370 1014 MobiDBLite consensus disorder prediction 453 537 - -
Cre02g0370 1014 Coils Coil 50 84 - -
Cre02g0370 1014 Pfam eIF-6 family 775 972 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre02g0370 1014 SUPERFAMILY Pentein 775 993 - -
Cre02g0370 1014 Coils Coil 228 255 - -
Cre02g0370 1014 SMART eIF6neu2 772 973 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre02g0370 1014 MobiDBLite consensus disorder prediction 96 112 - -
Cre02g0370 1014 MobiDBLite consensus disorder prediction 20 41 - -
Cre02g0370 1014 MobiDBLite consensus disorder prediction 459 476 - -
Cre02g0370 1014 Hamap Translation initiation factor 6 [eif6]. 761 1014 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cre02g0370 1014 MobiDBLite consensus disorder prediction 490 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0370 Cre-Chr2:836283 Cre06g2069 Cre-Chr6:28457668 7.60E-122 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0370 - - - 0.0