Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0393 ATGGATGCAGAACCTTCGATAACCAATGGCACAGATGATACAATCGTCTGCTATGCGCCCACCATGATTACTACAAATGGGGTGTGGCAAGGAGACAACCCTCTGGATTATTCTCTTCCTCTCTTCATTTTGCAGTTAACAATGGTGGTTTTGATGACTCGCGCTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGGGTGGGGTGATTTTGGGGCCTTCGGTACTAGGGAGAAGTGCTAAATTTGCCAACACCGTATTTCCTTTAAGAAGTGTAATGGTGCTTGAAACAATGGCCAATGTGGGGCTTCTCTACTTTCTGTTCTTGGTTGGTGTGGAGATGGATCTATCAGTGATTCGTCGAACAGGGAAGAAGGCAATGGCAATAGCTGTAGCAGGAATGATTCTTCCGTTCGGAATAGGAGCTGCCTTTTCATTCCAGTTGCACAAAGCAGATCAGAAATTGAACTACAACACTTACGTTATGTTTCTTGGTATTGCGCTCTCTGTGACAGCTTTCCCAGTGCTAGCTAGAATTCTTGCAGAGCTTAAACTGATAAATTCAGAGCTTGGAAGGATGGCCATGGCAGCTGCCCTTTTCAATGATATGTGTGCTTGGGTTCTCTTAGCTTTAGCCATAGCCTTATCTGAGAATGACTCCTCATCCTTGGCTTCTTTATGGGTTGTATTGTCAAGTGTAGGCTTTGTTTTGTTCTGCATCTTCATCGTTAGACCGACGATCTCGTGGATGATTCGAAAAACTCCAGAAGGGGAAAGTGTGAGTGAGTTCTACATTTGTTTGATTCTCACAGGGGTTATGATCTCAGGATTTGTTACAGATGCCATAGGAACACACTCCGTGTTTGGGGCTTTTGTGTTTGGCTTAGTTATCCCAAATGGATCACTTGGGGTGGCTTTAATTGAGAAACTTGAGGATTTTGTTTCAGGGCTTCTGCTCCCTCTTTTCTTTGCAATAAGTGGGCTTAAGACTAATGTGGCTAGCATAGAAGGATTAATCTCTTGGGTATCTATTCTATTTATAACTCTCCTTGCTTTTATTGGCAAAATCATTGGAACTCTTCTTGCCTCCATTTGTTATCAAATGTCCTATCGGGAAGGTGTCACATTAGGCTTGCTTATGAACACCAAGGGCCTTATTGAAATGATCATCCTCAATGTCGGAAAGGACCAAAAGGTGTTAGATGATCAAACATTCACAGTTATGGTGATTGTAGCCCTCGTTATGACCGGGATAATAACACCTGTAGTTACAATAATCTATAGGCCAACAAGAAGGTTTCTACCCTATAAGAAACGAACAATCCAAGCATCAAAGCCAGATTCAGAGTTCAGAGTTTTAGTTTGTATACACACACCTCGAAATGTGCCAACTATCATCCATCTCCTTGATGCCTCCCATCCAACCAAAAGATCCCCAATTTGCATTTATGTGCTACACTTGGTCGAACTCACAGGTCGAGCCTCAGCCATGCTCATTGTCCACAACACCAGAAAATCAGGTCGTCCTGCTTTAAATCGAACCCAAGCTCAATCAGATCACATCATCAATGCATTCGAGAACTACGAACAACACGTCGATTGCGTCTCTGTTCAACCCCTCACAGCCATTTCCCCTTACTCGACAATGCACGAAGACATATGCAATTTAGCCGAGGATAAACGGGTTGCCCTCATAATCATCCCATTCCATAAGCAACAAACAGTCGATGGAGGAATGGAAGCCACAAATCCAGCATTTAGATTGGTTAACCAAAATGTGTTAGCCAATGCCCCTTGCTCCGTCGGAATTCTAGTCGATCGAGGCTTAAACGGCTCGAATCGAGTTGCTTCAAACAAGGCAACTCATTATAACATAATCACGTTGTTCTTTGGTGGACAAGATGATAGAGAAGCCTTATCATACGCATGGAGAATGTCAGAACATCCCGGAGTGAGCTTAACCGTAATGCGATTCATCGCTGCACAAGAAATAATTGAACCAAAACCAGAAGAGGACGCACCAATCGTTTCAGCAATGGAAACAGAAATTAGCAGAGAGAGGAAACTCGATGAAGATTACATAAACGAATTTAGGACAAAGAACCCAAATAGCGAGTCAATTACTTACACAGAGAGAGTGTTGAACAACGGCGAGGAGACAGTGGCGGCCATAAGATCAATGGACGATGCTCACGACCTGTTCATCGTAGGAAGAGGTGAATCTCATGTATCACCTCTCACTGCCGGACTCACAGACTGGAGCGAATGTCCAGAGCTGGGAGCAATCGGTGATTTGTTAGCTTCATCGGATTTTGCAGCGACGACTTCAGTTTTGGTAGTGCAACAGTTCGGAGCAGCAATGGCGGTAGAACATGGAGAAGAAGAAGGTTCACCACGCAACGAAGAACCCATTGATCCCTACCAAAGCCTGAGATCAATGAATTTGAGGCAACATACTCCACCAAGAACTCAAATTATTTATGATACATGA 2511 43.61 MDAEPSITNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVLMTRALVFLLKPFRQPRVISEILGGVILGPSVLGRSAKFANTVFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGKKAMAIAVAGMILPFGIGAAFSFQLHKADQKLNYNTYVMFLGIALSVTAFPVLARILAELKLINSELGRMAMAAALFNDMCAWVLLALAIALSENDSSSLASLWVVLSSVGFVLFCIFIVRPTISWMIRKTPEGESVSEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNVASIEGLISWVSILFITLLAFIGKIIGTLLASICYQMSYREGVTLGLLMNTKGLIEMIILNVGKDQKVLDDQTFTVMVIVALVMTGIITPVVTIIYRPTRRFLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIIHLLDASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVDCVSVQPLTAISPYSTMHEDICNLAEDKRVALIIIPFHKQQTVDGGMEATNPAFRLVNQNVLANAPCSVGILVDRGLNGSNRVASNKATHYNIITLFFGGQDDREALSYAWRMSEHPGVSLTVMRFIAAQEIIEPKPEEDAPIVSAMETEISRERKLDEDYINEFRTKNPNSESITYTERVLNNGEETVAAIRSMDDAHDLFIVGRGESHVSPLTAGLTDWSECPELGAIGDLLASSDFAATTSVLVVQQFGAAMAVEHGEEEGSPRNEEPIDPYQSLRSMNLRQHTPPRTQIIYDT 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1105028 1107791 + CrPI670011_02g003930.1 Cre02g0393 489674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0393 836 MobiDBLite consensus disorder prediction 796 836 - -
Cre02g0393 836 FunFam Cation/H(+) antiporter 15 41 441 - -
Cre02g0393 836 PANTHER CATION/H + ANTIPORTER 17 790 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cre02g0393 836 MobiDBLite consensus disorder prediction 817 836 - -
Cre02g0393 836 Pfam Sodium/hydrogen exchanger family 54 431 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cre02g0393 836 Gene3D - 477 758 - -
Cre02g0393 836 Gene3D - 41 439 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0393 Cre-Chr2:1105028 Cre07g1122 Cre-Chr7:22410072 2.80E-207 dispersed
Cre02g0391 Cre-Chr2:1081305 Cre02g0393 Cre-Chr2:1105028 7.60E-78 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0393 K26731 - csv:101219265 1517.29