Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0415 ATGTTTTTGCTCTCAAAGGCCGCATTCATCGCCGGAATGAACCATTATGTCTATATTTTTTATCGCCAACTCACCGCCACCATCTTCCTTTCTCCCTTTGCCTTCTTTTTTCAATGGAAAGACGCCCCACCCTTGACATTCTTTACTTTCTGCAACATTTTTGTGCTATCTTTGTTTGGGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTTGCGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAACTGTCTTCCCGTCATCACCTTCTTTGTCGCGCTTTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGGTAGCAGGAATAATATTGTGCATTGGTGGTGTGGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAACTTGTTTAACAATCATCATCTCTTATCTATCCATCACCATTCTTCTAATTCTCTTACATTGCCCAAATCTTGGTTGAAGGGTTGCCTTTTGATGCTAGCTTCCAATACCTTATGGAGCATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTGTTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATGTTAGGCTTCTCTCAGTTGCATACTGTGGCATGATGACCGCAGTTACATTTTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGAGCAGTTTATGTAGCCATGTCTACACCTTTGGCTCTTATCATAACAATCTTCTTTTCTGCTATTTTTCTTGGAGAGAGTATCACTCTTGGAAGTAGTTTAGGGGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTTCTATGGGGAAAGAGCAAAGAGCAAAAAGTAAGTCAAGAAGGTAGCAAAGAATGCAACATGCAAAGGAAGGAAATCATTAAATTAGGAGATGATGAAAATGCAATTTCTTCAGTGGAAAATGTCTGA 1020 39.61 MFLLSKAAFIAGMNHYVYIFYRQLTATIFLSPFAFFFQWKDAPPLTFFTFCNIFVLSLFGIAICLNLYGIALAYTSATLAAATANCLPVITFFVALLLRMEVLRMKSIAGIAKVAGIILCIGGVGMLAFYKGPQFNLFNNHHLLSIHHHSSNSLTLPKSWLKGCLLMLASNTLWSIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNVRLLSVAYCGMMTAVTFCLQAWVIEKKGAVYVAMSTPLALIITIFFSAIFLGESITLGSSLGGMLLVGGLYFVLWGKSKEQKVSQEGSKECNMQRKEIIKLGDDENAISSVENV 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1310560 1318189 - CrPI670011_02g004150.1 Cre02g0415 489696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0415 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 304 - -
Cre02g0415 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 131 - -
Cre02g0415 339 Pfam EamA-like transporter family 3 120 IPR000620 GO:0016020(InterPro)
Cre02g0415 339 Pfam EamA-like transporter family 162 299 IPR000620 GO:0016020(InterPro)
Cre02g0415 339 PANTHER WAT1-RELATED PROTEIN 1 312 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0415 Cre-Chr2:1310560 Cre04g1198 Cre-Chr4:30630917 4.00E-83 dispersed
Cre02g0415 Cre-Chr2:1310560 Cre02g0416 Cre-Chr2:1321769 3.90E-163 tandem
Cre07g1334 Cre-Chr7:28133876 Cre02g0415 Cre-Chr2:1310560 1.90E-40 transposed
Cre08g0648 Cre-Chr8:19422400 Cre02g0415 Cre-Chr2:1310560 7.00E-70 transposed
Cre02g0415 Cre-Chr2:1310560 Cre04g1195 Cre-Chr4:30604513 4.00E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0415 - - - 0.0