Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0415 | ATGTTTTTGCTCTCAAAGGCCGCATTCATCGCCGGAATGAACCATTATGTCTATATTTTTTATCGCCAACTCACCGCCACCATCTTCCTTTCTCCCTTTGCCTTCTTTTTTCAATGGAAAGACGCCCCACCCTTGACATTCTTTACTTTCTGCAACATTTTTGTGCTATCTTTGTTTGGGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTTGCGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAACTGTCTTCCCGTCATCACCTTCTTTGTCGCGCTTTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGGTAGCAGGAATAATATTGTGCATTGGTGGTGTGGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAACTTGTTTAACAATCATCATCTCTTATCTATCCATCACCATTCTTCTAATTCTCTTACATTGCCCAAATCTTGGTTGAAGGGTTGCCTTTTGATGCTAGCTTCCAATACCTTATGGAGCATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTGTTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATGTTAGGCTTCTCTCAGTTGCATACTGTGGCATGATGACCGCAGTTACATTTTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGAGCAGTTTATGTAGCCATGTCTACACCTTTGGCTCTTATCATAACAATCTTCTTTTCTGCTATTTTTCTTGGAGAGAGTATCACTCTTGGAAGTAGTTTAGGGGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTTCTATGGGGAAAGAGCAAAGAGCAAAAAGTAAGTCAAGAAGGTAGCAAAGAATGCAACATGCAAAGGAAGGAAATCATTAAATTAGGAGATGATGAAAATGCAATTTCTTCAGTGGAAAATGTCTGA | 1020 | 39.61 | MFLLSKAAFIAGMNHYVYIFYRQLTATIFLSPFAFFFQWKDAPPLTFFTFCNIFVLSLFGIAICLNLYGIALAYTSATLAAATANCLPVITFFVALLLRMEVLRMKSIAGIAKVAGIILCIGGVGMLAFYKGPQFNLFNNHHLLSIHHHSSNSLTLPKSWLKGCLLMLASNTLWSIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNVRLLSVAYCGMMTAVTFCLQAWVIEKKGAVYVAMSTPLALIITIFFSAIFLGESITLGSSLGGMLLVGGLYFVLWGKSKEQKVSQEGSKECNMQRKEIIKLGDDENAISSVENV | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1310560 | 1318189 | - | CrPI670011_02g004150.1 | Cre02g0415 | 489696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0415 | 339 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 219 | 304 | - | - | |
Cre02g0415 | 339 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 21 | 131 | - | - | |
Cre02g0415 | 339 | Pfam | EamA-like transporter family | 3 | 120 | IPR000620 | GO:0016020(InterPro) | |
Cre02g0415 | 339 | Pfam | EamA-like transporter family | 162 | 299 | IPR000620 | GO:0016020(InterPro) | |
Cre02g0415 | 339 | PANTHER | WAT1-RELATED PROTEIN | 1 | 312 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0415 | Cre-Chr2:1310560 | Cre04g1198 | Cre-Chr4:30630917 | 4.00E-83 | dispersed | |
Cre02g0415 | Cre-Chr2:1310560 | Cre02g0416 | Cre-Chr2:1321769 | 3.90E-163 | tandem | |
Cre07g1334 | Cre-Chr7:28133876 | Cre02g0415 | Cre-Chr2:1310560 | 1.90E-40 | transposed | |
Cre08g0648 | Cre-Chr8:19422400 | Cre02g0415 | Cre-Chr2:1310560 | 7.00E-70 | transposed | |
Cre02g0415 | Cre-Chr2:1310560 | Cre04g1195 | Cre-Chr4:30604513 | 4.00E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0415 | - | - | - | 0.0 |