Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0416 ATGAAATATATGAAGATCATGGATGAGAATAAAAGAGCTTTCATGGCTGTGATTCTGATTCAAACCATTTACGCCGGCATGTTTCTCCTCTCGAAGGCTGCGTTCGATGGCGGAATGAACAACTATATCTTCGTTTTCTATCGCCAAGCCATCGCCACCGTCTTCCTTTCTCCCATAGCCTTCTTTTTCCAATGGAAGGATGCCCCACCTTTGACATTCTTCACCTTCTGCAAAATTTTTATGCTCTCTTTATTTGGGATAGCCATATGTTTAAATCTTTATGGGATTGCTCTTGTGTACACGTCAGCAACATTGGCTGCAGCAACTACAAATTGTCTTCCTGTCATCACCTTCTTCGTCGCTCTCTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGCTAGCAGGAATAATATTGTGCATTGGTGGTGTGGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAATTTGTTTAATAATCATCATCTCTTTTCTATCCATCACCATTCTTCTAATTCTCTTGCATTGCCCAAATCTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCCTATGGGGTATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTGTTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATATTAGGCTTCTCTCAGTTGCATACTGTGGTATCGTGGTAACCGCGGTTACATATTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATTTAGCCATGTCTACACCTTTTGCCCTTATCATTACTACCTTCTTCTCTGCTGTTTTTCTTGGGGAGAGTATCACTCTTGGAAGTACTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTAGCAAAGAATGCAACATGCAAGGGAATGAGATCACTAAGTTAGGAAATGAAACTCCAACTTCTTCAGTGGAAAATGTCTGA 1107 40.02 MKYMKIMDENKRAFMAVILIQTIYAGMFLLSKAAFDGGMNNYIFVFYRQAIATVFLSPIAFFFQWKDAPPLTFFTFCKIFMLSLFGIAICLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRMEVLRMKSIAGIAKLAGIILCIGGVGMLAFYKGPQFNLFNNHHLFSIHHHSSNSLALPKSWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNIRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPFALIITTFFSAVFLGESITLGSTLGGMLLVGGLYFVLWGKSKEQKISEGLKEGSKECNMQGNEITKLGNETPTSSVENV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1321769 1329424 - CrPI670011_02g004160.1 Cre02g0416 489697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0416 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Cre02g0416 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
Cre02g0416 368 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre02g0416 368 Pfam EamA-like transporter family 14 144 IPR000620 GO:0016020(InterPro)
Cre02g0416 368 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0416 Cre-Chr2:1321769 Cre04g1198 Cre-Chr4:30630917 2.40E-89 dispersed
Cre02g0415 Cre-Chr2:1310560 Cre02g0416 Cre-Chr2:1321769 3.90E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0416 - - - 0.0