Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0437 | ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTTTCCAACTTCCTTCAATTCCTCAAACCCATCCTCCTTCCCCTCCATTTGATCCTCCAGATTTCTCCATTTCTAGTAATAATACTACTACTAATAATAATAATAATAGTAATTCCAATCTCAATGAAACCCTACTTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAGGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTCAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAAAGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCTGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTAA | 744 | 38.04 | MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFFQLPSIPQTHPPSPPFDPPDFSISSNNTTTNNNNNSNSNLNETLLSSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1591036 | 1593069 | - | CrPI670011_02g004370.1 | Cre02g0437 | 489718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0437 | 247 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 66 | 233 | IPR044810 | GO:0003700(InterPro) | |
Cre02g0437 | 247 | MobiDBLite | consensus disorder prediction | 43 | 80 | - | - | |
Cre02g0437 | 247 | FunFam | WRKY transcription factor 57 | 156 | 230 | - | - | |
Cre02g0437 | 247 | ProSiteProfiles | WRKY domain profile. | 165 | 230 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre02g0437 | 247 | SMART | WRKY_cls | 170 | 229 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre02g0437 | 247 | MobiDBLite | consensus disorder prediction | 60 | 80 | - | - | |
Cre02g0437 | 247 | SUPERFAMILY | WRKY DNA-binding domain | 162 | 229 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre02g0437 | 247 | Gene3D | WRKY domain | 157 | 223 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre02g0437 | 247 | Pfam | WRKY DNA -binding domain | 171 | 227 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0437 | Cre-Chr2:1591036 | Cre04g1218 | Cre-Chr4:30885401 | 2.20E-46 | dispersed | |
Cre02g0437 | Cre-Chr2:1591036 | Cre02g0440 | Cre-Chr2:1646248 | 1.30E-19 | proximal | |
Cre05g0068 | Cre-Chr5:893718 | Cre02g0437 | Cre-Chr2:1591036 | 2.50E-32 | transposed | |
Cre02g0437 | Cre-Chr2:1591036 | Cre04g1225 | Cre-Chr4:30981811 | 2.30E-19 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53071 | PF03106 | WRKY | 4.20E-24 | CL0274 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0437 | - | - | - | 0.0 |