Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0451 ATGGCTTCTTCAAATCCCATCTCTCTTCTCACATTTCTCACTTTCCTCTTCCTCCTCTCTTCTTCATCTTCCGCTGTCGTTCCAACAGCAGAGATTTGCCAATCCACCGCCTACCCGTCCTTCTGCAACTCTTTCCTTCCCAACTCCCCGGCCTCGGTCCACTCCCATTGTCGCTTCACTCTCCGCAATGCCCTCCACCACGCACATGCCTTCTTGGCACTCGTCGACTCTCACCTCAGCCTTTTCCCCTCCCTCTCCGCCCTCCATGACTGCCGTGGCCTCGCGGAAGCCAACCTCGACTTTATATCCCAAACTTTTTCCATAGTCAACTCCACAGCCATGGTCCTTCCTTATTACCAAGCCCATGAGATGGTGTCCTTAATGAGTGCAATGATCACCAATGAAGACACTTGTTATGAAGGGTTGACGGGTTTAGGCTCGGCCTTGGGCTTGGTTGATAAGGTGTTGGAGTCCATCTCTTTTGATAGAAAGCTATATAGTTTGTACCTTTCGTTGTTCAAAATGGGTTGGGTTTCTGAGGACGTGAAGGCTCCTATGTTGCCAAATATGAACCATTTTGGGGTCGGGAAAGGGCAGTTAAAGCTTAAAATGTCGCCCAAAGACCGAGCGTATTATGAGCGCTTGGTGCATAGGAAGAAGCCGGCGGCCGCTAGAAGGCTTCTTCAGACCAATTACCAAGATGATGGAATTTTGATCAATGGCATGGTTGCGGTGGATCAAACTGGAGCATACGATTTTACAACCATCAGCGACGCCATTGCGGCCGCTCCGAACAAGTCCTCTGTCGCTGACGGATACTTCTTGATCTTCGTGACCGCTGGGATTTACAATGAGAGTGTGTTGGTCCCAAAATATAAAAGGTATGTGTTGATGATCGGAGAAGGTAACAACCAAACTATCATCACCGGCAACAAAAACGTCATTGATGGTTCCACCACTTTCAATAGCGCAACCGTTGTCGTGGAGGGAACAGGGTTTTTCGGAGTAAACCTAACGATCAGCAACACGGCCGGCGCCGCCAAACACCAAGCAGTGGCATTGCGAGTGAGTGCCGACAATGTGACATTATATAGTTGCATATTCGAAGGCTATCAAGACACTCTCTACACACACTCCCTCCGTCAATTCTATAGAGAATGTGATATCTACGGTACCGTCGACTTCATCTTTGGCAATGCTGCCGTCGTTTTGCAAAACTGCAACCTCTACGCCCGTCTCCCAATGAGTGGCCAGTTCAACGCCCTCACGGCGCAGGGCCGAACCGACCCCAATCAGAACACCGGAACCTCCATCCACAACTGCACCATCAAGCCGACGTCGGAGCTCGCCGCGAGCCCCGCCACGAAGAGCTACTTAGGGCGGCCGTGGAAGGAATATTCTCGGACAATTTACATGCAATCGTTTATTGATTCCTTTATTGATCCTGCAGGCTGGAAGGAGTGGGACGGCACTTTGAATTTAAACACTTCTTATTACGCCGAGTTTAATAACTCAGGGCCGGGCTCCGACACTTCACGGCGGGCTTCATGGGTGGTCGGTGTCATCAACGCCACTGTTGCTAGTAACTTCACAGTGTCTCAATTCTTGGCCGGGGATCAATGGCTACCGCCTACCGCCGTGCCCTACACCGGTGGTTTGATATCATAA 1668 50.54 MASSNPISLLTFLTFLFLLSSSSSAVVPTAEICQSTAYPSFCNSFLPNSPASVHSHCRFTLRNALHHAHAFLALVDSHLSLFPSLSALHDCRGLAEANLDFISQTFSIVNSTAMVLPYYQAHEMVSLMSAMITNEDTCYEGLTGLGSALGLVDKVLESISFDRKLYSLYLSLFKMGWVSEDVKAPMLPNMNHFGVGKGQLKLKMSPKDRAYYERLVHRKKPAAARRLLQTNYQDDGILINGMVAVDQTGAYDFTTISDAIAAAPNKSSVADGYFLIFVTAGIYNESVLVPKYKRYVLMIGEGNNQTIITGNKNVIDGSTTFNSATVVVEGTGFFGVNLTISNTAGAAKHQAVALRVSADNVTLYSCIFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYARLPMSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTSELAASPATKSYLGRPWKEYSRTIYMQSFIDSFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRASWVVGVINATVASNFTVSQFLAGDQWLPPTAVPYTGGLIS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1773530 1776839 + CrPI670011_02g004510.1 Cre02g0451 489732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0451 555 CDD PMEI-like_3 32 177 - -
Cre02g0451 555 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Cre02g0451 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
Cre02g0451 555 PANTHER PECTINESTERASE 13 544 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cre02g0451 555 FunFam Pectinesterase 238 553 - -
Cre02g0451 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cre02g0451 555 Pfam Plant invertase/pectin methylesterase inhibitor 31 168 IPR006501 GO:0004857(InterPro)
Cre02g0451 555 Gene3D - 239 553 IPR012334 -
Cre02g0451 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Cre02g0451 555 SMART PMEI_2 22 172 IPR006501 GO:0004857(InterPro)
Cre02g0451 555 SUPERFAMILY Pectin lyase-like 240 552 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0451 Cre-Chr2:1773530 Cre11g1871 Cre-Chr11:30372525 3.90E-144 dispersed
Cre02g0451 Cre-Chr2:1773530 Cre09g0531 Cre-Chr9:4970996 4.30E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0451 K01051 - csv:101216984 931.013