Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0457 ATGGCCAAATGCTTTGTTTTGAATTTGTTATCTGATGTTCGCAAGTTGAGAAAAACGGTGGAAAGTTGGAAACGAACTTATGATGATGCTCTTTTGAAGCCAAGAAAGAAAATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTACATGCAGTAGCCAAAGCAATGGGGAATCAATTTCTTCTTCATGTATGGGAATTGGATTTCGAGGTCGAAAGCGAACGAAAAGAACATTCTCCGACCATGTTTATGCTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATATTCATGAATGGAAAAAGTCGTTCTTCTTGTATTTTCACGCAACAAGGTCGCAAGGGCATAAACCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCGGAGGACACGATCTTTTGTGGTGTATTCGATGGACATGGACCTTACGGTCATCTCGTTGCTCGAAAAGTGAGGGATACATTGCCTATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGACTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACACCTCCAGATTGTGAAGATTCTGAGAAAGATGGTTTTGTAGAGGACTCGCAGAATTCGGTATGGAGAGATGCTTTTTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACACCCTAATCTGGACTGCTTTTGTAGTGGTAGTACTGCAGTCACCATAGTTAAACAGGGGTCAAATCTCTTCATGGGGTATATAGGCGACTCAAGAGCAATCCTCGCCTCGAAGGACGCCAATGATTCCACAGTGGCCGTCCAATTGACCGTGGATCTTAAGCCAGATTTACCAAGAGAAGCTGAAAGAATAAAGCGGTGTAAAGGTAGGGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGGGTGTGGTTACCTTTCGATGATGCGCCCGGTTTAGCGATGGCTCGAGCATTTGGCGACTTCTGTTTAAAAGAATATGGAGTTATCTCTATACCCGAATTCTCTCATCGAACCCTCACCGACGCTGATCAGTTCATCGTTCTTGCATCAGATGGGGTATGGGATGTCTTGAGCAATGAAGAGGTGGTTGACATAGTGTCCTCAGCCCCAACCCGGGCATCAGCTGCAAGGTCCGTGGTGGACTCGGCTGCTCGTGAATGGAAACTCAAATACCCTACCTCAAAAATGGATGATTGTGCTGTCGTCTGCTTATTTTTGGACGGGAGGATGGACTCCGAATCCGACTGTGACGAACAAGGCTTCTCATCTGCAACATTGCGTAGTAATCATTCGGGTACTGCTATCGAGTCCGATGATGGCCAGAGGTCTGAGCCATGTTTGCAAAGGAATAACACTGTCAGATCATCCGAAGAAAGCAAGGGATTACCTGTCGAAGACAGGGAGGTTGGTGCTGCTGTACCTGCAGAAGATCAAAACTGGTTGGGTTTGGAAGGAGTCACTCGAGTGAACTCACTTGTTCAACTTCCTAGATTTTCCGAGGAAAGGCCAGCGTCATAG 1527 45.78 MAKCFVLNLLSDVRKLRKTVESWKRTYDDALLKPRKKMGGCVSTSSHSTCSSQSNGESISSSCMGIGFRGRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNDSGKTCFQRNLKTPPDCEDSEKDGFVEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVDIVSSAPTRASAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGRMDSESDCDEQGFSSATLRSNHSGTAIESDDGQRSEPCLQRNNTVRSSEESKGLPVEDREVGAAVPAEDQNWLGLEGVTRVNSLVQLPRFSEERPAS 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1823589 1827737 + CrPI670011_02g004570.1 Cre02g0457 489738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0457 508 PANTHER PROTEIN PHOSPHATASE 104 408 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre02g0457 508 Gene3D - 94 411 IPR036457 -
Cre02g0457 508 SUPERFAMILY PP2C-like 93 411 IPR036457 -
Cre02g0457 508 CDD PP2Cc 102 409 IPR001932 -
Cre02g0457 508 MobiDBLite consensus disorder prediction 420 479 - -
Cre02g0457 508 ProSiteProfiles PPM-type phosphatase domain profile. 103 409 IPR001932 -
Cre02g0457 508 FunFam probable protein phosphatase 2C 52 94 412 - -
Cre02g0457 508 Pfam Protein phosphatase 2C 204 386 IPR001932 -
Cre02g0457 508 SMART PP2C_4 92 407 IPR001932 -
Cre02g0457 508 MobiDBLite consensus disorder prediction 420 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0457 Cre-Chr2:1823589 Cre02g1841 Cre-Chr2:31693041 8.30E-85 dispersed
Cre03g1328 Cre-Chr3:23326276 Cre02g0457 Cre-Chr2:1823589 1.20E-105 transposed
Cre04g0763 Cre-Chr4:26180100 Cre02g0457 Cre-Chr2:1823589 1.60E-92 transposed
Cre08g0420 Cre-Chr8:14172281 Cre02g0457 Cre-Chr2:1823589 4.60E-109 transposed
Cre10g0602 Cre-Chr10:5556265 Cre02g0457 Cre-Chr2:1823589 4.50E-118 transposed
Cre11g1393 Cre-Chr11:17786343 Cre02g0457 Cre-Chr2:1823589 2.00E-113 transposed
Cre02g0457 Cre-Chr2:1823589 Cre02g2054 Cre-Chr2:34011208 6.40E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0457 - - - 0.0