Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0464 | ATGGGTTGGAAAAGATCTTCGAGGAACGGCAATTTGAGGATCTGGGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGGGATTTTTCTGCTATTAGTAGCTTACATACCGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCATCGGGCAAGACCCATGCGGAGACGCATGGCAGGGTGTTGTGTGTAATGATTCGAGCATCATTAAAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTGTTTTCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAGTTTACCGGTTACCATGCAGAACTTTTTTCTTTCAGCTAATGAGTTCACGGGAAGTATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCTATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTCGAAGCCATTTCTCAATTGGTCAATTTAGACTTGTCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTGTCGGGGACCCTTGATGTTCTACAAGACCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCACCACCAGTTTCTGGAGCACCACCATCTTCTCAACAAAAACCTAAGAAACAGGCTGATGGACCATCGGCACCAGAGGAATCCAGTTCTGGAAAAAATAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCATTCATAATTTTGGTCTTGGCATGTGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAGTTGATAGTGTTTCCAAGCGACATCAGATAGGTGCTTATAGAGGTGAGAGAGAGAATGCTGGAAATCAGGGAGCCATGCCCCATACAAATGATCAGATTCCTAAAGTTCCAAAAGAGCCAGTTGTAAGGCCGAAGCAGGAAACTCAAACAGACGTTCAGAAGGTTCCAAAAGATCATGAAGAGAGAAAGAAAAACATGCCAAGAATGAGTGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCTCCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCAGCCGAAGTTCCTCCCTTGAAGCCTCTCACTAAACATAGAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGATGATGAATTTCTTGAGTTAGTGAATAATATCGATAGAATCCGGCATGCTAATGTGGTCGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGTAGTGGTGGAACATTGCAGGATGCACTGCACTCAGATGAAGAGTTCAGAAAGAAACTTTCGTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCTCCTGTTATTCATAGGAATTTCAAGTCTGCGAATGTCCTACTTGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCTGGTCAGCTTCTGACAGCATATGGTTATGGAGCGCCAGAATTTGAATCAGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAGTTCCTAGTCAGGTGGGCGATTCCACAGCTTCATGACATAGAAGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCAATACCCTGCCAAATCCTTATCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGTCGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACTTGGCAGTGGTTCAAGTGAAGATTGA | 2367 | 44.7 | MGWKRSSRNGNLRIWVQVLVGFVICAAQVLFGITNPGDFSAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIKIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSSLPVTMQNFFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFEAISQLVNLDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSKPAPAPPVSGAPPVSGAPPSSQQKPKKQADGPSAPEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRVDSVSKRHQIGAYRGERENAGNQGAMPHTNDQIPKVPKEPVVRPKQETQTDVQKVPKDHEERKKNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPPVEEVTAVPIVPAEVPPLKPLTKHRITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGQYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPLGSGSSED | 788 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1860602 | 1868067 | + | CrPI670011_02g004640.1 | Cre02g0464 | 489745 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 357 | 410 | - | - | |
Cre02g0464 | 788 | Pfam | Protein tyrosine and serine/threonine kinase | 500 | 772 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0464 | 788 | Pfam | Leucine Rich Repeat | 148 | 167 | IPR001611 | GO:0005515(InterPro) | |
Cre02g0464 | 788 | Pfam | Leucine Rich Repeat | 172 | 193 | IPR001611 | GO:0005515(InterPro) | |
Cre02g0464 | 788 | Pfam | Leucine Rich Repeat | 101 | 120 | IPR001611 | GO:0005515(InterPro) | |
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 255 | 280 | - | - | |
Cre02g0464 | 788 | Gene3D | Ribonuclease Inhibitor | 39 | 256 | IPR032675 | - | |
Cre02g0464 | 788 | ProSiteProfiles | Protein kinase domain profile. | 498 | 776 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g0464 | 788 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 779 | - | - | |
Cre02g0464 | 788 | SUPERFAMILY | Protein kinase-like (PK-like) | 474 | 772 | IPR011009 | - | |
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 281 | 306 | - | - | |
Cre02g0464 | 788 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 576 | 784 | - | - | |
Cre02g0464 | 788 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 468 | 575 | - | - | |
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 434 | 455 | - | - | |
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 247 | 312 | - | - | |
Cre02g0464 | 788 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 35 | 260 | - | - | |
Cre02g0464 | 788 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 196 | 776 | IPR046959 | - | |
Cre02g0464 | 788 | SUPERFAMILY | L domain-like | 54 | 241 | - | - | |
Cre02g0464 | 788 | MobiDBLite | consensus disorder prediction | 383 | 410 | - | - | |
Cre02g0464 | 788 | Gene3D | Phosphorylase Kinase; domain 1 | 469 | 575 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0464 | Cre-Chr2:1860602 | Cre07g1782 | Cre-Chr7:33278222 | 1.00E-105 | dispersed | |
Cre02g0464 | Cre-Chr2:1860602 | Cre04g1889 | Cre-Chr4:36527528 | 2.90E-145 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63844 | PF07714 | PK_Tyr_Ser-Thr | 1.50E-42 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0464 | - | - | - | 0.0 |