Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0488 ATGGCGCGTTATGATTTGGAATTGCACTTTAGACTCAAACATTACTCCACAATTCTAAGTCATCGCCACGCTCGTTTCGGTCATATCCTCGTCTGTTGGACGTCATCGTCTCCAAAATATACAATTCGCAAAAGTGAAGTGAATTCTTCAGTGAGAGTCAAAAATGGTGTATGTGAAAGCGGAAGGTTGTTGATCATTGGCTATAGAATCGCACCATCTGGACCATCAAAGAACGTGCAATCGACGAAAGTCTTCTATATCTTAGAGTTTAAGAGTTGCATAAGTGATGAGAGAGGGGATACTCTTGTATCGGCAGGATCGAGATTCGAACTCGGATTCTTTAAGCCATATGGCAGCTCTCATAGCAGAAGATACTTGGGAATATGGTATTACAAATCAAATCCAAGTACGGTTGTTTGGGTTGCCAATCGAGACAGCCCACTTGCTGGTTCAGATGGTATCTTTAAGATTGAGGATGATGGCAACCTCAAAATATATGATGGAAATCGGAATCTGTATTGGTCAACAAACATTGGAAGTTCTGTACTCAATCGAAGGACTCTGAAGTTATTGGATAATGGAAATCTGGTCTTGAGTTATGCAGATCAAGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGTTAATGGATGATAACTTGGTGCTGACTTCATGGAAGAGCTATGATGACCCGGCTCGAGGGAACTTCACTTTTCAGCTAGATCAAGACGGAGGTCAATATGTCATTTGGAAAAGATCAGTTAAATTCTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCATTATCTAAACTGGGAAGATCACAAAGTGTGGTCTCAGATTTGGGTGGAGCCAAGAGATAGATGCAATGTGTATAATGCGTGTGGAGATTTTGCTAGCTGTAATAGTGAGGGTGGTGTAGCTTGCAAATGCCTGCCTGGTTTTGAACCTACCTCTCCAGGGAGTTGGAATACTGGAGATTATTCAGGTGGATGCATTAGGAAATCACCAATATGCAGTGTCAACGATGACAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCGGACTTCCAGTTTAATGCGAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCAGTGTCAGGCTTACTCATATTTGGAAGCTAATACATCAAGGCAGGGTTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAGTTTGATAATGGCCGTGACCTCAATGTTCGAGTAGCAGTTAGAGATCTAGAATCAACTGTCAGAAACTGTGGAACATGTGGGACAAACCTCATTCCTTATCCACTTAGCACAGGACCTAAATGTGGTGACCCCATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTAAACTTTGAAGCAGCAGGTGGAACATACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTTACATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAACCAAAGCCCTTCAGCTGAACCATTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCCGAGAATTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCAGTTGGGAGCCTCCGTTAGAGCCAACTTGTTCTTCAACTACGGACTGCAAAGACTGGCCTTATTCAACTTGCAACATAAGTAAAGATGGAAATAAAAGATGCCTTTGCATAGCAGACTTTCATTGGAATGGCTGGAGCTTGAATTGCACTACAGATCACAACAAAGGAAAGGATGGAAGAGGCAAAACGACCTTCTCTGTGATTATTGTTGCAACATCCATTTGTCTTGTCCTTCTGATGATTCTCTCATGTACTGTGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATTTAATGCTTCACTTGTACGACAATGAGAGACGTGTCAAAGACCTGATCGAATCAGGTCGATTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCAACAGAGAACTTCTCAAATGCAAATAAGCTTGGACAAGGAGGCTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTCTCAAGTGGTTCAGGACAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTGTTAATCGCGAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTACGAATATATGCCAAATAAAAGCTTAGACGCCTTTATATTTGATCAAAAGCTGAGTGTGGCATTGGATTGGGACATCCGCTTCAACGTCATTTTGGGAATTGCTCGTGGCCTTCTTTATTTACACCAAGATTCGAGGTTGAGAATTATTCATAGAGATTTGAAGACGAGCAACATTCTTCTAGATGAGGAGATGAATCCTAAAATATCCGACTTTGGCTTGGCAAGGATCTTTGGAGGGAAAGAAACTGCCACAAATACCAAAAGGGTGGTAGGCACTTATGGATACATGTCACCAGAATATGCATTGGATGGCATATTTTCTGTCAAATCTGACGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTAGTGGAAAAAGGAACACGGGATTCTATCACTTGGAGAAAGCTTTGAGTCTTCTAGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGATTTAATGGAGCAAACACTGAGGGGGAATTGCAAAAGAGATGAATATTTGAAGTGTTTAAATGTGGGGCTGTTGTGTGTGCAGGAAGATCCATGGGATCGACCCACCATGTCGAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCTCCGAAACCACCAGCTTTCGTCGTACGGCGGTGCCCCTCGAGCAGAGCTTCCTCCTCCACCAAACCAGAAACCTTCTCCCATAATGAGTTGACGGTCACCTTAAAAGATGGTAGATAG 3228 41.95 MARYDLELHFRLKHYSTILSHRHARFGHILVCWTSSSPKYTIRKSEVNSSVRVKNGVCESGRLLIIGYRIAPSGPSKNVQSTKVFYILEFKSCISDERGDTLVSAGSRFELGFFKPYGSSHSRRYLGIWYYKSNPSTVVWVANRDSPLAGSDGIFKIEDDGNLKIYDGNRNLYWSTNIGSSVLNRRTLKLLDNGNLVLSYADQEDLSEHILWQSFDYPTDTFLPGMLMDDNLVLTSWKSYDDPARGNFTFQLDQDGGQYVIWKRSVKFWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYIDTRLVLNSSGQLHYLNWEDHKVWSQIWVEPRDRCNVYNACGDFASCNSEGGVACKCLPGFEPTSPGSWNTGDYSGGCIRKSPICSVNDDSDTFLSLKMMKAGNPDFQFNAKDDFDCKLECLNNCQCQAYSYLEANTSRQGSACWIWSGDLNNLQDEFDNGRDLNVRVAVRDLESTVRNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVNFEAAGGTYKVKFIDSEARKFYIQTKEAGDCGDKNWITKALQLNHSSPFHVTSWCNFKETNPENFSLKTSNEVEISWEPPLEPTCSSTTDCKDWPYSTCNISKDGNKRCLCIADFHWNGWSLNCTTDHNKGKDGRGKTTFSVIIVATSICLVLLMILSCTVFYIYFSKTGLIERQESRGNSQKDLMLHLYDNERRVKDLIESGRFKEDDTNGIDIPFFDLETILIATENFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDIRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTKRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIISGKRNTGFYHLEKALSLLGYAWDLWMKDEGLDLMEQTLRGNCKRDEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLKDGR 1075
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2055648 2061151 + CrPI670011_02g004880.1 Cre02g0488 489769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0488 1075 SUPERFAMILY alpha-D-mannose-specific plant lectins 138 243 IPR036426 -
Cre02g0488 1075 CDD PAN_AP_plant 397 481 - -
Cre02g0488 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 878 890 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0488 1075 ProSiteProfiles Bulb-type lectin domain profile. 87 211 IPR001480 -
Cre02g0488 1075 ProSiteProfiles Protein kinase domain profile. 757 1035 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g0488 1075 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 722 832 - -
Cre02g0488 1075 Pfam PAN-like domain 397 465 IPR003609 -
Cre02g0488 1075 SMART serkin_6 757 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g0488 1075 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 81 215 - -
Cre02g0488 1075 CDD STKc_IRAK 763 1028 - -
Cre02g0488 1075 SUPERFAMILY Protein kinase-like (PK-like) 741 1058 IPR011009 -
Cre02g0488 1075 CDD B_lectin 99 218 IPR001480 -
Cre02g0488 1075 Pfam Domain of unknown function (DUF3403) 1030 1075 IPR021820 GO:0004674(InterPro)
Cre02g0488 1075 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 94 1042 - -
Cre02g0488 1075 Pfam D-mannose binding lectin 137 234 IPR001480 -
Cre02g0488 1075 Gene3D Transferase(Phosphotransferase) domain 1 833 1035 - -
Cre02g0488 1075 Gene3D Phosphorylase Kinase; domain 1 722 832 - -
Cre02g0488 1075 SMART ntp_6 401 480 IPR003609 -
Cre02g0488 1075 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 833 1036 - -
Cre02g0488 1075 Pfam Protein tyrosine and serine/threonine kinase 760 1025 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0488 1075 ProSiteProfiles PAN/Apple domain profile. 397 481 IPR003609 -
Cre02g0488 1075 SMART blect_4 91 218 IPR001480 -
Cre02g0488 1075 MobiDBLite consensus disorder prediction 1050 1075 - -
Cre02g0488 1075 Pfam S-locus glycoprotein domain 269 376 IPR000858 GO:0048544(InterPro)
Cre02g0488 1075 MobiDBLite consensus disorder prediction 1050 1068 - -
Cre02g0488 1075 Gene3D - 94 215 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0488 Cre-Chr2:2055648 Cre02g1440 Cre-Chr2:25600982 2.10E-271 dispersed
Cre02g0483 Cre-Chr2:2021305 Cre02g0488 Cre-Chr2:2055648 4.80E-106 proximal
Cre01g1444 Cre-Chr1:27693108 Cre02g0488 Cre-Chr2:2055648 7.80E-99 transposed
Cre02g0488 Cre-Chr2:2055648 Cre04g1858 Cre-Chr4:36262618 4.30E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63846 PF07714 PK_Tyr_Ser-Thr 2.10E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0488 - - - 0.0