Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0544 ATGTCGATGAAGGTCACCATGACCTCCGGCGGAATGCCTTCCATACCTTCATCGATTTCGCAGCCGCCGGTCACTTTACCGCTCAGAAATATCCCCGGCAGCTACGGTTTGCCGCTGTTCGGATCCATCGGTGACCGGCTGGATTACTTCTGGTTTCAAGGACCCGAGAAGTTCTTCAGGTCTCGGATGGAGAAGAATCAAAGTACGGTTTTCAGAACGAATGTTCCTCCGTCGTTCCCTTTCTTCTTCACCGATCCGAGAGTGATTGCGGTTCTGGATTGCAAGTCGTTTGCGCATCTATTCGACATGGAAATCGTGGAGAAGAAGAATGTTCTGGTTGGTGATTTCATGCCGAGCACAAGTTTCACCGGAAATATGAGAGTCTGTGCGTATTTGGATACGTCGGAATCTCAACACTCGAAGATCAAAAACTTCGTCATGGACGTTCTGCGGCGGAGCTCGAGGATTTGGATACAGGAGTTGGAATCGAACCTATCGACGATGTGGGACAGCATTGAATCCGAAATCGCAAAGGACACAAAATCCAGCTTCAGAAACCATCTCCAACCAACTCTTTTCAATTTCTTCTCCAAAACCCTGGCCGGCGCCGACACTGCAAAATCACCGGAAGTGGCTAAATCCGGCTACATCGACGTCATAATTTGGCTGGGGCTCCAGCTGGTCCCCACCATCCACATCGGCATTCTCCAACCCCTGGAAGAAATATTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCTCTCGCTACCAAAGACTCTACGATTTCATCCAAAAAGAAGGGGAAGAAGTGGTTGAGCGAGGCGTTTCGGAGTTCGGGTTGACGAAGGATGAAGCAATTCACAATCTCATCTTCACCATGGGATTCAACGCCTACGGTGGTTTCAGTCTCTTCTTCCCGGTTCTACTCGATCGGATACTCAACGACAAAACCGGTTTACAACAGAGAATCCTCGAGGAAGTCAAGGCAAAAACCGGCTCCGGTCTGACATTCGAGTCAGTCAAGGAGATGGATCTCATCTACTCCGTCGTTTACGAGACACTCCGGCTTGACCCGCCGGTTCCGACCCAATACGCGAGAGCCAGAAAGGATTTCAAGCTAAGTTCCTACGATTCAGCGTATACAATCAAGAAAGGGGAGCTGCTTTGTGGGTATCAGCCGCTGGTGATGAGAGACCCGAAGGTGTTCGATGAACCGGAGACGTTTAATCCGGACCGGTTCCGGGGAGAGAAAGGGGCGGCGCTGCTGGATTATTTGTTCTGGTCGAACGGGCCGCAGACGGGACTGCCGAGCGAGCATAACAAGCAGTGCGCGGGGAAGGATTTGGTGGTGCTGACGGCGGTGGTGTTCGTGGCTTACATATTTCGAAGGTATGATTGGATTGCAGGGGAAGGAGGTTCGATTACAGCTCTTCAAAGGACCAATTTGAAGTGA 1458 50.96 MSMKVTMTSGGMPSIPSSISQPPVTLPLRNIPGSYGLPLFGSIGDRLDYFWFQGPEKFFRSRMEKNQSTVFRTNVPPSFPFFFTDPRVIAVLDCKSFAHLFDMEIVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFVMDVLRRSSRIWIQELESNLSTMWDSIESEIAKDTKSSFRNHLQPTLFNFFSKTLAGADTAKSPEVAKSGYIDVIIWLGLQLVPTIHIGILQPLEEIFLHSFRLPFFPIASRYQRLYDFIQKEGEEVVERGVSEFGLTKDEAIHNLIFTMGFNAYGGFSLFFPVLLDRILNDKTGLQQRILEEVKAKTGSGLTFESVKEMDLIYSVVYETLRLDPPVPTQYARARKDFKLSSYDSAYTIKKGELLCGYQPLVMRDPKVFDEPETFNPDRFRGEKGAALLDYLFWSNGPQTGLPSEHNKQCAGKDLVVLTAVVFVAYIFRRYDWIAGEGGSITALQRTNLK 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2544411 2553037 - CrPI670011_02g005440.1 Cre02g0544 489825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0544 485 FunFam Allene oxide synthase, chloroplastic 26 485 - -
Cre02g0544 485 Pfam Cytochrome P450 320 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 Gene3D Cytochrome P450 26 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 CDD CYP74 60 475 - -
Cre02g0544 485 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 PRINTS E-class P450 group IV signature 382 396 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0544 485 PANTHER CYTOCHROME P450 26 31 466 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cre02g0544 485 SUPERFAMILY Cytochrome P450 26 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0544 Cre-Chr2:2544411 Cre08g1486 Cre-Chr8:27676305 1.70E-103 dispersed
Cre02g0544 Cre-Chr2:2544411 Cre02g0911 Cre-Chr2:6154478 2.90E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0544 K10528 - csv:101223126 852.047