Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0637 ATGGGTCTCTCCAGTCTCCCAGCTCCATCTGAAGGAGTTCTGAATGTGATTCTTGTAAACGCTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTGATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCATCATTAGTCCCATCAACAGATCCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAGTTACCTCGAGATGTTTCGAAACCGATATCCAAGGATCCGATTTGATAAATTACAGGGCTCAGAATGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCTGAGATAAATCACTTATCTTGTGGTCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTAGATTACTGGAACATCACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGAAGAAGAGAAATCGTGCTTTTGGTACAGCTTTCAGATTTTGGCACTCCTGCAACTTGGACAATCTGTGTAG 510 42.94 MGLSSLPAPSEGVLNVILVNAALSISMFKCIVRLILHMVGIRLSWPSSLVPSTDPFESSSELGDSNFGSSWSYLEMFRNRYPRIRFDKLQGSECREHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFWYSFQILALLQLGQSV 169
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 3302224 3303979 - CrPI670011_02g006370.1 Cre02g0637 489918
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0637 169 SUPERFAMILY RING/U-box 93 146 - -
Cre02g0637 169 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Cre02g0637 169 PANTHER - 1 154 IPR044249 -
Cre02g0637 169 Pfam Ring finger domain 98 141 IPR001841 -
Cre02g0637 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 146 IPR013083 -
Cre02g0637 169 SMART ring_2 99 140 IPR001841 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0637 Cre-Chr2:3302224 Cre02g1390 Cre-Chr2:23192990 2.50E-54 dispersed
Cre02g0637 Cre-Chr2:3302224 Cre05g0222 Cre-Chr5:2138930 8.50E-10 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0637 K16285 - csv:101215843 291.582