Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0642 ATGAAACAAATTCTTCTTCATCATCTTCTTCTTCTTCTCCTTCCATTCCTACTTCTCACTCCCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCATTCCCACGGCGGTCGAAAACCAGCCAATATCGTCACCGATTCTCACCACGAATTCCTCCGACCGTTTCTCGAAAGTGAAGAGGAGTTTACCGAAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGCACCCGAAAGTGGTATCAATTTTTTTGAATAGAGGAAGAAAGTTACACACAACAAGATCATGGGAGTTCATGGGAATGGAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCAATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCTGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCTAAGGGAAAGATTCTTGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTGTTGGCTGGTGCCGTGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACATGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTCCCTGAGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAACGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCCGGAACGTACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGAACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGAAGAACTATGTATACGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGGTAGTCTAG 2310 46.15 MKQILLHHLLLLLLPFLLLTPTSAIKRSYVVYMGAHSHGGRKPANIVTDSHHEFLRPFLESEEEFTEDAIFYSYTRHINGFAAMLEDEVAAQLAKHPKVVSIFLNRGRKLHTTRSWEFMGMENNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRKLIGARYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAVGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPEAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLNFTRLGEEQSFKVFMKVKEQNVGRKNYVYGDLIWSDGKHHVRSPIVVKVV 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3362212 3372293 + CrPI670011_02g006420.1 Cre02g0642 489923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0642 769 FunFam p69E protein-like 642 769 - -
Cre02g0642 769 Pfam Peptidase inhibitor I9 28 111 IPR010259 -
Cre02g0642 769 FunFam subtilisin-like protease SBT1.5 350 494 - -
Cre02g0642 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Cre02g0642 769 ProSiteProfiles Serine proteases, subtilase domain profile. 115 625 - -
Cre02g0642 769 Pfam Subtilase family 140 594 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre02g0642 769 Pfam PA domain 398 471 IPR003137 -
Cre02g0642 769 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cre02g0642 769 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cre02g0642 769 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cre02g0642 769 CDD PA_subtilisin_like 357 487 - -
Cre02g0642 769 FunFam Subtilisin-like protease SBT1.5 142 362 - -
Cre02g0642 769 CDD Peptidases_S8_3 109 592 IPR034197 -
Cre02g0642 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 765 IPR045051 -
Cre02g0642 769 Gene3D Peptidase S8/S53 domain 142 638 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre02g0642 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cre02g0642 769 Pfam Fibronectin type-III domain 670 766 IPR041469 -
Cre02g0642 769 FunFam Subtilisin-like protease SBT5.3 18 111 - -
Cre02g0642 769 SUPERFAMILY PA domain 409 492 IPR046450 -
Cre02g0642 769 Gene3D - 642 769 - -
Cre02g0642 769 SUPERFAMILY Subtilisin-like 110 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre02g0642 769 Gene3D - 350 494 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1043 Cre-Chr1:17328766 Cre02g0642 Cre-Chr2:3362212 3.90E-251 dispersed
Cre02g0642 Cre-Chr2:3362212 Cre10g0638 Cre-Chr10:5970357 4.50E-268 dispersed
Cre02g0642 Cre-Chr2:3362212 Cre04g1357 Cre-Chr4:32375499 3.50E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0642 - - - 0.0