Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0655 ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCTCCTCTCGTTACGCCGATCAATTTCTCGGTTCAGAGCTCCAACTTCAAAATTTCTCACAAACCCATCTCGCCGATCCCAACAACTCGCCGGAAAGTCACCAGAAAAATCTCAATCCGGCCGATTCAACCACCCCCACTAGCGGCGGTTCGTCCACGCGCCGTTCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATTGTAACACGTGACAGCCCCAATGCTCTGAGATCGCACGTGCTGGAAGTCTCCCCCGGCTCCGATGTGGTCGAATCCGTCTCGAGTTACGCCACGCGCCGCCGCCATGGCCTCTGCATTCTCGCCGGCACCGGCGCCGTCACAAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCGGGAACTGTTATGACGCTTCATGGAACGTTTGAGATTGTGTCTCTGACTGGTACGGCGTTGCCACCGCCGGCGCCTCCGGGTGCCGGAGGGATAACTGTTTATTTGTCCGGCGGGCAAGGGCAGGTCGTCGGAGGAAGTGTTGTTGGGCCGTTGACGGCGTCAAGTCCCGTTGTATTGATGGTGGCGTCGTTTACTAATGCGGTGTATGATCGGCTGCCGCTGGACGAGGCGGAGCCGCCGGTGCAAGCTCAGCCATCGGCATCACCATCTTCAGATATTACAGGTGGAGGCGGGCAGCTTGGGGGCATCGGAAGCTTCAACCTGCCCGACGACAATTACGGTTGGAATGGCAATACATCGAGGCCTCCGACGACGCTGTGA 801 59.93 MSDLNSAVHGGSSRYADQFLGSELQLQNFSQTHLADPNNSPESHQKNLNPADSTTPTSGGSSTRRSRGRPAGSKNKPKPPVIVTRDSPNALRSHVLEVSPGSDVVESVSSYATRRRHGLCILAGTGAVTNVNLRQPAAPSGTVMTLHGTFEIVSLTGTALPPPAPPGAGGITVYLSGGQGQVVGGSVVGPLTASSPVVLMVASFTNAVYDRLPLDEAEPPVQAQPSASPSSDITGGGGQLGGIGSFNLPDDNYGWNGNTSRPPTTL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3479554 3481866 - CrPI670011_02g006550.1 Cre02g0655 489936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0655 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 235 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Cre02g0655 266 FunFam AT-hook motif nuclear-localized protein 91 220 - -
Cre02g0655 266 CDD DUF296 92 158 IPR005175 -
Cre02g0655 266 Gene3D - 91 220 - -
Cre02g0655 266 MobiDBLite consensus disorder prediction 27 89 - -
Cre02g0655 266 MobiDBLite consensus disorder prediction 27 68 - -
Cre02g0655 266 MobiDBLite consensus disorder prediction 217 266 - -
Cre02g0655 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
Cre02g0655 266 MobiDBLite consensus disorder prediction 251 266 - -
Cre02g0655 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 206 IPR005175 -
Cre02g0655 266 ProSiteProfiles PPC domain profile profile. 88 226 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0655 Cre-Chr2:3479554 Cre09g2174 Cre-Chr9:40811400 3.50E-58 dispersed
Cre02g0655 Cre-Chr2:3479554 Cre06g0808 Cre-Chr6:1427099 1.60E-58 transposed
Cre02g0655 Cre-Chr2:3479554 Cre02g2008 Cre-Chr2:33535797 1.60E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0655 - - - 0.0