Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0710 ATGGCTTGGTTTTTTACCTTTCTTCTTTTCTTTATTGTCTCTTCAGCTAATGCTTGTGATCGTTGTATTTTTCAATCTAAGGCGGCTCATTACTATGAGGATACACCTACTTCATCTGCTGTCCCTTCTCTCTACCGACAAGGAATGGGTTGTGGTGCCTGCTACCAGGTAAGATGCAAGAATGCAACATTGTGTAACACAATGGGGACCAAAGTAGTTTTGACAGATCAAAATTCTGATAACAGAACAGATTTTGTTCTTAGTAAAAAAGCTTTTTCTGCAATGGCTTTAAAGGGCAAAGGTCAACAACTTTTGAAAACTGGAATGGTTGATATTGAATACAAGAGGATACCTTGCGAATACAATAAAAATTTATTAATACACGTAGTAGAATGGAGCCACAAACCATATTATTTGGCTATTAAATTCCTCTACCAAGGAGGTCAAACCGACATAACTGCAGTCAACATAGCAGCTCAGGATGGTTCTGGAGAGTGGCAATACATGAAAAGAAACTATGGAGCCATTTGGGATACAAATAAAGTGCCAGAAGGGGCAATTAAGTTAGTGGTGATTGTAGTTTCAGGGTACAAAAATGGGAGAGGGATCATGATGAGTTATGCACTTCCTAGTGATTGGAAAAATGGAGAAATTTATGATACTGGAATTCAAATCAAAGATATTGCTTCTGAAGCTTGCAATCCTTGGCAATGTGGTGACCAACCATGGAAATGA 735 38.23 MAWFFTFLLFFIVSSANACDRCIFQSKAAHYYEDTPTSSAVPSLYRQGMGCGACYQVRCKNATLCNTMGTKVVLTDQNSDNRTDFVLSKKAFSAMALKGKGQQLLKTGMVDIEYKRIPCEYNKNLLIHVVEWSHKPYYLAIKFLYQGGQTDITAVNIAAQDGSGEWQYMKRNYGAIWDTNKVPEGAIKLVVIVVSGYKNGRGIMMSYALPSDWKNGEIYDTGIQIKDIASEACNPWQCGDQPWK 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3984314 3986896 - CrPI670011_02g007100.1 Cre02g0710 489991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0710 244 Pfam Lytic transglycolase 40 112 IPR009009 -
Cre02g0710 244 PRINTS Expansin/Lol pI family signature 107 123 IPR007118 GO:0005576(InterPro)
Cre02g0710 244 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576(InterPro)
Cre02g0710 244 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576(InterPro)
Cre02g0710 244 PRINTS Expansin/Lol pI family signature 166 180 IPR007118 GO:0005576(InterPro)
Cre02g0710 244 SUPERFAMILY PHL pollen allergen 126 220 IPR036749 -
Cre02g0710 244 Pfam Expansin C-terminal domain 134 196 IPR007117 -
Cre02g0710 244 Gene3D - 121 226 IPR036749 -
Cre02g0710 244 PANTHER EXPANSIN-B3 21 227 - GO:0009505(PANTHER)|GO:0009506(PANTHER)
Cre02g0710 244 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 16 124 IPR007112 -
Cre02g0710 244 Gene3D - 13 120 IPR036908 -
Cre02g0710 244 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 137 221 IPR007117 -
Cre02g0710 244 SUPERFAMILY Barwin-like endoglucanases 33 123 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0710 Cre-Chr2:3984314 Cre02g0713 Cre-Chr2:3996642 5.00E-96 dispersed
Cre02g0709 Cre-Chr2:3978745 Cre02g0710 Cre-Chr2:3984314 5.20E-91 tandem
Cre02g0710 Cre-Chr2:3984314 Cre02g0711 Cre-Chr2:3990405 1.20E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0710 - - - 0.0