Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0739 ATGGTTATGGAGGATAACGAGAGCTGTGGGAGTAGAGCGTACGACTCGTTGTCGCCGGCGCAGAGTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTACGGCGTTTGAAGGATTCAAACAACGAAGAGGCTATGCAGCCTGGTTTCGATGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAAAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCACGATCCGGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAAGCCATTTCTGATGAGCATTCTGCTGAATTTGCTGATTCATGTTCTGTAAAAGACACTGATCATAATTCTGCAAATTTCGTGGGCAGACAGAGCATACATCCACCACCTGCCTTCGGGTCATCTCCTAACCTTGAGGCCTTGGCCCTTGAAGCTAATAACGCTCAGGATCTGGAGGTTGATCAGTCTGTACATGCCAGAACACAGTTTTTCCGGCCTATGCATGAAATCACCTTCTCTACGGATGATAAGCCGAAACTTCTTAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACGGTTGACGGTTTCTCATTGGATGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTTTTACAGAATCGGGTTTGGCCAAATCGTAAATCCTCGTCTCCTGTGGGGGAACTCGATATAACAACTAAATGTGAGCTTGATCGGGTGGAAATACCCACAGATGGGACCGATGTATGGGAAATTAATCCTAGACATTTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGGGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATACAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTAAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGCACGAAGCCCCCAAGCTTGTGCATTGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGAACTTTTAGGCTTCCATCTTTGCTCAAGGTGGCCATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTAAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGGGTAAAAGCTCAATCAGGAGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACCGGAAAGCTACCTTATGAATTCCTAACACCATTACAAGCCGCAGTCGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCTAAGCACACTAATCCCAAGCTGGCTGAGTTGCTAGAAAAATGTTGGCAGCAAGATCCAACATGCAGGCCTGACTTCTGTGAAATTATCGATATATTGTTGCAGATAAGTAAGGAAGTAGCTGAAGACGGCGACGAACGACGAAAGGAGAAGAGTGGAGGATTATTTTCGGTGTTGAGACGAAACCATCACTAA 1716 44.11 MVMEDNESCGSRAYDSLSPAQSRQQRQKFEVYNEVLRRLKDSNNEEAMQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAISDEHSAEFADSCSVKDTDHNSANFVGRQSIHPPPAFGSSPNLEALALEANNAQDLEVDQSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYEETERLKTALEKEVLQNRVWPNRKSSSPVGELDITTKCELDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKTERVNTDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPTCRPDFCEIIDILLQISKEVAEDGDERRKEKSGGLFSVLRRNHH 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4229029 4238828 + CrPI670011_02g007390.1 Cre02g0739 490020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0739 571 FunFam Serine/threonine-protein kinase isoform 1 281 369 - -
Cre02g0739 571 SUPERFAMILY Protein kinase-like (PK-like) 276 540 IPR011009 -
Cre02g0739 571 Pfam Protein tyrosine and serine/threonine kinase 291 539 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 MobiDBLite consensus disorder prediction 11 26 - -
Cre02g0739 571 CDD ACT_TyrKc 179 246 - -
Cre02g0739 571 Gene3D Phosphorylase Kinase; domain 1 281 369 - -
Cre02g0739 571 MobiDBLite consensus disorder prediction 1 26 - -
Cre02g0739 571 SUPERFAMILY ACT-like 179 243 IPR045865 -
Cre02g0739 571 ProSiteProfiles ACT domain profile. 181 257 IPR002912 -
Cre02g0739 571 Gene3D Transferase(Phosphotransferase) domain 1 370 564 - -
Cre02g0739 571 CDD STKc_MAP3K-like 297 540 - -
Cre02g0739 571 SMART serkin_6 291 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 ProSiteProfiles Protein kinase domain profile. 291 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 FunFam serine/threonine-protein kinase HT1 370 560 - -
Cre02g0739 571 PANTHER SERINE-THREONINE PROTEIN KINASE 45 542 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre02g0739 571 PRINTS Tyrosine kinase catalytic domain signature 467 489 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 PRINTS Tyrosine kinase catalytic domain signature 365 378 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 PRINTS Tyrosine kinase catalytic domain signature 448 458 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g0739 571 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0739 Cre-Chr2:4229029 Cre10g0303 Cre-Chr10:1911369 2.70E-225 dispersed
Cre02g0739 Cre-Chr2:4229029 Cre04g1775 Cre-Chr4:35707722 3.70E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63855 PF07714 PK_Tyr_Ser-Thr 3.70E-74 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0739 - - - 0.0