Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0739 | ATGGTTATGGAGGATAACGAGAGCTGTGGGAGTAGAGCGTACGACTCGTTGTCGCCGGCGCAGAGTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTACGGCGTTTGAAGGATTCAAACAACGAAGAGGCTATGCAGCCTGGTTTCGATGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAAAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCACGATCCGGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAAGCCATTTCTGATGAGCATTCTGCTGAATTTGCTGATTCATGTTCTGTAAAAGACACTGATCATAATTCTGCAAATTTCGTGGGCAGACAGAGCATACATCCACCACCTGCCTTCGGGTCATCTCCTAACCTTGAGGCCTTGGCCCTTGAAGCTAATAACGCTCAGGATCTGGAGGTTGATCAGTCTGTACATGCCAGAACACAGTTTTTCCGGCCTATGCATGAAATCACCTTCTCTACGGATGATAAGCCGAAACTTCTTAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACGGTTGACGGTTTCTCATTGGATGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTTTTACAGAATCGGGTTTGGCCAAATCGTAAATCCTCGTCTCCTGTGGGGGAACTCGATATAACAACTAAATGTGAGCTTGATCGGGTGGAAATACCCACAGATGGGACCGATGTATGGGAAATTAATCCTAGACATTTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGGGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATACAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTAAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGCACGAAGCCCCCAAGCTTGTGCATTGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGAACTTTTAGGCTTCCATCTTTGCTCAAGGTGGCCATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTAAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGGGTAAAAGCTCAATCAGGAGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACCGGAAAGCTACCTTATGAATTCCTAACACCATTACAAGCCGCAGTCGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCTAAGCACACTAATCCCAAGCTGGCTGAGTTGCTAGAAAAATGTTGGCAGCAAGATCCAACATGCAGGCCTGACTTCTGTGAAATTATCGATATATTGTTGCAGATAAGTAAGGAAGTAGCTGAAGACGGCGACGAACGACGAAAGGAGAAGAGTGGAGGATTATTTTCGGTGTTGAGACGAAACCATCACTAA | 1716 | 44.11 | MVMEDNESCGSRAYDSLSPAQSRQQRQKFEVYNEVLRRLKDSNNEEAMQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAISDEHSAEFADSCSVKDTDHNSANFVGRQSIHPPPAFGSSPNLEALALEANNAQDLEVDQSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYEETERLKTALEKEVLQNRVWPNRKSSSPVGELDITTKCELDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKTERVNTDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPTCRPDFCEIIDILLQISKEVAEDGDERRKEKSGGLFSVLRRNHH | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4229029 | 4238828 | + | CrPI670011_02g007390.1 | Cre02g0739 | 490020 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0739 | 571 | FunFam | Serine/threonine-protein kinase isoform 1 | 281 | 369 | - | - | |
Cre02g0739 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 276 | 540 | IPR011009 | - | |
Cre02g0739 | 571 | Pfam | Protein tyrosine and serine/threonine kinase | 291 | 539 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Cre02g0739 | 571 | CDD | ACT_TyrKc | 179 | 246 | - | - | |
Cre02g0739 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 281 | 369 | - | - | |
Cre02g0739 | 571 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cre02g0739 | 571 | SUPERFAMILY | ACT-like | 179 | 243 | IPR045865 | - | |
Cre02g0739 | 571 | ProSiteProfiles | ACT domain profile. | 181 | 257 | IPR002912 | - | |
Cre02g0739 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 370 | 564 | - | - | |
Cre02g0739 | 571 | CDD | STKc_MAP3K-like | 297 | 540 | - | - | |
Cre02g0739 | 571 | SMART | serkin_6 | 291 | 541 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | ProSiteProfiles | Protein kinase domain profile. | 291 | 541 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 408 | 420 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | FunFam | serine/threonine-protein kinase HT1 | 370 | 560 | - | - | |
Cre02g0739 | 571 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 45 | 542 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cre02g0739 | 571 | PRINTS | Tyrosine kinase catalytic domain signature | 467 | 489 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | PRINTS | Tyrosine kinase catalytic domain signature | 402 | 420 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | PRINTS | Tyrosine kinase catalytic domain signature | 365 | 378 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | PRINTS | Tyrosine kinase catalytic domain signature | 448 | 458 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g0739 | 571 | PRINTS | Tyrosine kinase catalytic domain signature | 511 | 533 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0739 | Cre-Chr2:4229029 | Cre10g0303 | Cre-Chr10:1911369 | 2.70E-225 | dispersed | |
Cre02g0739 | Cre-Chr2:4229029 | Cre04g1775 | Cre-Chr4:35707722 | 3.70E-65 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63855 | PF07714 | PK_Tyr_Ser-Thr | 3.70E-74 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0739 | - | - | - | 0.0 |