Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0767 | ATGGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGACACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCATACGCACACATGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTTGTTACTGATGACACTGCAGAATCAACTGAGAAGAAGTCGAAGAAACGCCCGTTGGGTAACCGTGAAGCTGTTCGTAAGTACCGCGAGAAAAAGAAAGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCATTGAATCAGCATTTGATGAAGAGATTGCAGGGGCAGGCAGCACTCGAGGCTGAGATTGCTAGGCTTAAGTGTTTGCTTGTGGATATTAGGGGCAGAATCGAAGGGGAGATTGGTTCTTTCCCTTACCAAAAAGCTGTTAATCCTAACTTGTCCAACCCAAGCATCCCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCCGGGGTCGATGGCAACAGAAGCAGTGAAGGTGCTGTGATAAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCCTCAATGTTTGGCAAATCATGACTCGGGATCAAAAGAACTACCTGGGTGTGGAGTAGGGAATGCAGTTTCAAATGATATTTCTTCAGGCAAGAAGAAAGGAGGAAGTCGTAAAGAGACATGGGCCTGA | 753 | 45.02 | MEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSIPGAYVMNPCNMQCEDQVYCLHPGVDGNRSSEGAVINGQSFGACEFENPQCLANHDSGSKELPGCGVGNAVSNDISSGKKKGGSRKETWA | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4524998 | 4526997 | - | CrPI670011_02g007670.1 | Cre02g0767 | 490048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0767 | 250 | SMART | brlzneu | 67 | 134 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0767 | 250 | Pfam | Basic region leucine zipper | 68 | 124 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0767 | 250 | Gene3D | - | 57 | 135 | - | - | |
Cre02g0767 | 250 | Coils | Coil | 80 | 114 | - | - | |
Cre02g0767 | 250 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 69 | 116 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0767 | 250 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 2 | 172 | IPR031106 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER) | |
Cre02g0767 | 250 | MobiDBLite | consensus disorder prediction | 55 | 79 | - | - | |
Cre02g0767 | 250 | CDD | bZIP | 73 | 126 | - | - | |
Cre02g0767 | 250 | MobiDBLite | consensus disorder prediction | 231 | 250 | - | - | |
Cre02g0767 | 250 | SUPERFAMILY | Leucine zipper domain | 71 | 117 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0767 | Cre-Chr2:4524998 | Cre02g1507 | Cre-Chr2:27262587 | 2.30E-75 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53103 | PF07716 | bZIP_2 | 7.60E-14 | CL0018 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0767 | K25785 | - | csv:101208161 | 471.085 |