Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0786 ATGGACGAATCTGAGAAATTCGCTGAGAGTTTAGGTTCTCTGGAAATGTCGAATTCCCCTTCGAACTTGACCCAGAGCCAGAATGGGAATGTTAAAAACAATGATGCTTTATTCACAGTGGATGAGATTGAAGAAAGTGAGTTTTCGAAGCTATTGGATAGGCCAAGGCCGTTGAACATGGAGAGACAGAGGTCGTTTGATGAAAGATCGCTTGGGGATTTGGCGATTGGTTTTTCCCCACGGCTATCGACGAGAGTTTCTTCAGAGAACTTTGGTCGATTGACTGATTATTATGATCAAACTCCATCCCCCGGCAGAAAATCGGATTTCAATACTCCAAGATCACAGACTGGATTCGAGCAGCATCCTATGGTGGCTGAAGCTTGGGAAGCTTTGAGGCGTTCGTTGGTCCATTTCCGTGGCCAACCAGTTGGTACTATTGCTGCGTTGGACTGTACTGAAGAAAATCTTAATTATGATCAAGTGTTTGTGAGAGACTTCGTCCCGAGCGCATTTGCTTTTCTAATGAATGGGGAGCCTGAAATAGTAAAAAACTTTATCTTAAAAACTCTTCGGCTTCAGTCATGGGAGAAAAAGATTGACAGATTCCAGCTTGGAGAAGGGGTGATGCCTGCTAGTTTCAAAGTGCTTCATGATCCAGTGAGGAATACTGAAACTTTAATTGCAGATTTTGGAGAGAGTGCAATAGGAAGAGTTGCTCCGGTTGACTCTGGATTTTGGTGGATTATATTGCTTAGAGCATACACAAAGTCCACTGGTGATACTTCCTTGGCTGAACTGCCAGAATGCCAAAAGGGAATGCGCCTTATTTTGAGTCTGTGTCTTTCAGAAGGGTTTGACACATTCCCAACCCTTCTCTGTGCTGATGGATGCTGCATGATTGATAGACGAATGGGTGTATATGGCTACCCAATTGAAATTCAAGCTCTTTTCTTTATGGCTTTAAGGTGTGCTTTGCTTTTACTTAAGCAAGACCACGAGGGGAAGGACTTTGTAGAAAGAATAACAAAACGGCTTCACGCCTTGAGCTATCACATGAGAACTTACTTTTGGCTTGACCTAAAGCAACTAAATGATATATACCGATATAAAACTGAAGAATACTCTCACACTGCTTTGAACAAGTTCAATGTAATACCCGATTCTCTTCCCGAATGGATTTTTGACTTCATGCCAACTCGTGGTGGTTACTTTATCGGAAACGTCAGCCCTGCAAGAATGGATTTCCGTTGGTTTTGCTTGGGAAACTGCATTGCAATTCTTTCTGCCTTGGCAACACCAGAGCAGTCCACTGCCATTATGGATCTTATTGAATCACGTTGGGAAGAGCTGGTCGGAGAAATGCCTCTAAAGGTTTGTTACCCTGCCATTGAAAGTCACGAGTGGCGGATTGTAACTGGGTGTGATCCAAAAAATACAAGATGGAGTTACCATAATGGTGGTTCTTGGCCAGTTCTCCTATGGCTTCTAACAGCTGCATGTATCAAGACCGGGCGACCCCAGATTGCGAGACGTGCACTCGAACTGGCTGAAACCAGGCTACTGAAAGACAACTGGCCAGAATATTATGATGGGACAGTTGGGCGGTACATTGGGAAACAGGCACGGAAGTTTCAGACGTGGTCGATTGCAGGTTATTTAGTGGCAAAGATGATGCTGGAAGACCCATCTCATTCAGGCATGGTGTCCTTGGAGGAAGACAAGCAGATGAAACCTGTAATGAAAAGCCAAGGATACAGAGGAAGCATGATCATGATGCATTGTTATGATCCCTTGGATCCTAATGGAAACATTACCATTACTTATGATATTCAAACTTGGACCACTCGTGGTTATGTGGGGAGGGTCACTGTCCAAAACTACTACCAGTTTCGGCATGTGGAGAAGCCTGGTTGGAGGCTTGGGTGGACATGGACGAGGGGTGAAGTCATCTGGTCAATGAGTGGAGCTTTCGTGACTAAACAGGGGAATTGCTCATTGTTCAAATTTGATCCTCCACATTCCTGTGAGAAGAGCCCTGTCATTCTCAATCTCGTGTCGGAGGCATCATTGGAAAACAGGTCGGAGGGTTGTTGTCGCAGTGGGGTTCTTTCTGCTTGGGCTGTAGACCCTTCCAAATCCTTCTCTTCGTTTGAAATCTCAGTGGGGAGCATGGATGGAGATGGCAATGAGCAACCGCCCGCCAATATTACTCTCATGGCGCCTGGTCCTGGTTACACTTGCAGCCCCTTTTTGGACGCTCATCCAACTGTTTCTTCTCTGATTGATGGCAAAAGACAAGTTCAGGCTTTTAGAACATGGAAATCAACATGTACTTACTCCATATTTGTGTATAACAAGACACCACTCTGTTGTGTCTCACTCTCAGCATTTTACAATCCCTCCATCACACCTTGCCCTACATGCAGCTGTGGATGCAGAGAAGCAAACCAAACCTCTGTTCAATGTACAAGAGACAAACTCCAGTTGTCGACCACGGAATCGGCTAATCTTCTTGCCTCAGTACAGTGCTCGGATCACATGTGTCCGGTTCGAGTGCATTGGCATGTTAAGACGAACTACATCGACCACTGGAAGGTGAAACTCACAGTTTCCAACTACAACTATGACAGAAACTACTCAAACTGGAACATCCTAGTGCAGCATCCAGGATTTAGCCAATCAACAGAAGCATTTAGTTTCAATAGTTCACAACTTTCATCCGTCAGATATGGAGATGAGTTGGCTCTCTTTTGGGGCATTGAGTATTACAACACAGAGCTTGTGCAATCCACTGAGAGTAATGTAGGGTATGTGACAACAGATATTCTTCTTGAGAAAGATTTAGAATCATTCACATTAAGCAATGGTTGGGCCCTTCCAAGAAGAGTTTATTTCAATGGAGATAACTGTCAAATGCCTTTACCAGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAGCAAAGCCTCTCACTTTTCATCTCCATTATTCTTTTTTTGAACTTCTTGTTTTGGTGA 3021 44.26 MDESEKFAESLGSLEMSNSPSNLTQSQNGNVKNNDALFTVDEIEESEFSKLLDRPRPLNMERQRSFDERSLGDLAIGFSPRLSTRVSSENFGRLTDYYDQTPSPGRKSDFNTPRSQTGFEQHPMVAEAWEALRRSLVHFRGQPVGTIAALDCTEENLNYDQVFVRDFVPSAFAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPVRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDTSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKQDHEGKDFVERITKRLHALSYHMRTYFWLDLKQLNDIYRYKTEEYSHTALNKFNVIPDSLPEWIFDFMPTRGGYFIGNVSPARMDFRWFCLGNCIAILSALATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRALELAETRLLKDNWPEYYDGTVGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHSGMVSLEEDKQMKPVMKSQGYRGSMIMMHCYDPLDPNGNITITYDIQTWTTRGYVGRVTVQNYYQFRHVEKPGWRLGWTWTRGEVIWSMSGAFVTKQGNCSLFKFDPPHSCEKSPVILNLVSEASLENRSEGCCRSGVLSAWAVDPSKSFSSFEISVGSMDGDGNEQPPANITLMAPGPGYTCSPFLDAHPTVSSLIDGKRQVQAFRTWKSTCTYSIFVYNKTPLCCVSLSAFYNPSITPCPTCSCGCREANQTSVQCTRDKLQLSTTESANLLASVQCSDHMCPVRVHWHVKTNYIDHWKVKLTVSNYNYDRNYSNWNILVQHPGFSQSTEAFSFNSSQLSSVRYGDELALFWGIEYYNTELVQSTESNVGYVTTDILLEKDLESFTLSNGWALPRRVYFNGDNCQMPLPDTFPMLPNGSSKQSLSLFISIILFLNFLFW 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4707380 4718273 + CrPI670011_02g007860.1 Cre02g0786 490067

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0786 1006 PANTHER - 103 580 IPR024746 GO:0004575(PANTHER)|GO:0005987(PANTHER)|GO:0033926(InterPro)
Cre02g0786 1006 FunFam probable alkaline/neutral invertase B 153 556 - -
Cre02g0786 1006 MobiDBLite consensus disorder prediction 94 117 - -
Cre02g0786 1006 MobiDBLite consensus disorder prediction 1 33 - -
Cre02g0786 1006 Pfam COBRA-like protein 619 781 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cre02g0786 1006 Pfam Alkaline and neutral invertase 128 563 IPR024746 GO:0033926(InterPro)
Cre02g0786 1006 SUPERFAMILY Six-hairpin glycosidases 128 556 IPR008928 GO:0005975(InterPro)
Cre02g0786 1006 MobiDBLite consensus disorder prediction 11 33 - -
Cre02g0786 1006 Gene3D - 153 558 IPR012341 GO:0005975(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0786 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0786 Cre-Chr2:4707380 Cre09g0957 Cre-Chr9:9786972 1.90E-250 dispersed
Cre02g0786 Cre-Chr2:4707380 Cre07g1947 Cre-Chr7:34884676 2.50E-117 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g97 . . Bda06g00969 . . . . Bma12g00525 . Cmo11g01723 . . . . . Cpe04g00574 . Bhi05g01747 . . . . . . Cla02g00449 Cam02g0456 Cec02g0455 Cco02g0474 Clacu02g0457 Cmu02g0452 Cre02g0786 Cone12ag1209 Cone8ag1261 . . . Csa07g00078 . Cme01g01286 . . . . . . . . . . . Cma11g01397 . . . . . . . . . . . . . . . . . . . Lsi11g01179 . Chy01g00699 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001478 3 3 4 3 4 1 3 1 1 1 1 1 3 2 2 3 1 6 3 2 2 2 2 2 2 2 2 4 2 5 73