Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0810 ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGCGTTACCGCCTCTTCTCGCCGCTCCGGCGCCGGTGATGCTCCGTCTGATGTTCCGGCTGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCTTCCAAAAGCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCCGAATCCGGTCGGTTCTTGAATCTTCAGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAG 459 55.12 MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGAGDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRSESGRFLNLQDFRRRCHVDSPSSLLRESRPLLFDFADKSVC 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4872610 4873068 - CrPI670011_02g008100.1 Cre02g0810 490091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0810 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 108 IPR003676 GO:0009733(InterPro)
Cre02g0810 152 Pfam Auxin responsive protein 17 108 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0810 Cre-Chr2:4872610 Cre11g0873 Cre-Chr11:5839461 6.60E-46 dispersed
Cre02g0810 Cre-Chr2:4872610 Cre05g2018 Cre-Chr5:32187649 9.90E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0810 K14488 - csv:101203091 270.781