Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0814 | ATGAAAATCGGTGTACAAGTAGTCATCGTCATCGTCGTCGTGAGTGAGAAGAGAGAGAGAGAGAGAGAGAAAGTGCCGACGCGATTTTTAGAGAGAGAAATCGCCGGCGTCCTCGTGATTCCCGCCGGCGGATTGCTTTATATAACCTCACTGCTAATTCTGGACGGAAATGCTTCTCTCAATGGCGGAGAATTAAGGGTTTTTTCCTCTTCAGACTCTTCCGCCGTCGTCGGAGGGAGGTGGCTAACTTTCCGGCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATTACTTCCGATGAGATTGTGAGGTGGAGTGGCGTAGGCGAAATGGGTGATACTGAAGATGCTAACACTGAGAACATGCGAAATCTTCAATGTTCGTATGGAGTATCTTCTTCTTCAGCTGGAAATCTTCCTTTCTCGATGGATCAACTTAAAATTTCCCAAATGAACTGCTCACAAATCCGTCCACCGCACTTTCAGTCAAATTTTCTTGCGGATAATAGTAGAAGAATTGGGATACCTCCTAGCCCCAACTCACCGCAGATCCCACCAATTTCACCGTATTCTCAGATCCCGATCTCGCGTCCGATGAATCAGCAAAATTATAACCCGGTGCCTACTCATTCCCGATCGTTGTCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGCCCATCTCCATTTCGTGAATCCCCAACTACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATAACAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGAGGGCCAATTCTTCTAAGATGGGAGATTCTTTACCTCCTCGTAAAGCACATAGGCGGTCTAGTAGTGATATTCCATTTGGATTATCTTCAATGATTCAGCCATCTCCTCTTCTCCCATTCAATAGCTCTGGTGGATTGGAACGATCAACTAGTAGTAAAGAGAATGCTGGCTTACTAAAGCCCGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTGGAGAAAAGCGTTGACAACAATTTAGAAGGAATGGGTGAGAGGAAATCTGATGGGGACAGCGTGGACGACTTGTTTTCTGCTTATATGAATTTGGATAATATCGATTTGTTCAACTCTTCTGGGACTAACGACAAGAATGGTCAAGAGAATCGAGAGGATTTGGATAGTAGGGGTAGTGGAACAAAGACAAATGGGGGTGAGAGCAGTGATAATGAAGCAGAAAGCAGTGTAAATGAAAGCGGGGATAGCGCTCAAATGCCTGGATTGAATTCATCTGCTGAGAAGAGGGAAGGGATCAAACGGACCGCAGGGGGAGATATTGCTCCAACTACCAGACATTACCGAAGTGTCTCCATGGATAGTTTCATGGGCAAGTTGCAGTTTGGTGATGAGTCTCCCAAAATGCCTCCCACACCACCTGGCGTTCGCCCGGGGCAACTTTCTTCAAACAACTTAGTTGATGGTAATTCTGCTCCATTCAGTTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCCGAGATTGCTTTGACTGATCCCAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCGAAAGAGCGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCCGCTCAACTCACACTTCTACAGAGAGATTCCGTGGGCCTTACAAACCAGAATAATGAACTGAAGTTTCGTCTACAAGCCATGGAACAACAAGCACAACTACGGGATGCACTTAACGAAGCCTTAACCGCGGAGGTTCAGAGATTGAAACTCGCTACAACAGAGCTAAATGCGCAGTCTCATCCCTCCAACGGAGTAATGCCCCAATCTTCCATCAATCACCATGGCCTCCAGCTTCAGCTTCAGCACCAGCAACAACAACAACAGATCCAGCAGAATGGGAATGCAACCACAAAACCAGAATCCAACCAATAA | 2034 | 46.17 | MKIGVQVVIVIVVVSEKREREREKVPTRFLEREIAGVLVIPAGGLLYITSLLILDGNASLNGGELRVFSSSDSSAVVGGRWLTFRRGHCRASGRLGVITSDEIVRWSGVGEMGDTEDANTENMRNLQCSYGVSSSSAGNLPFSMDQLKISQMNCSQIRPPHFQSNFLADNSRRIGIPPSPNSPQIPPISPYSQIPISRPMNQQNYNPVPTHSRSLSQPSFFSLDSLPPLSPSPFRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRANSSKMGDSLPPRKAHRRSSSDIPFGLSSMIQPSPLLPFNSSGGLERSTSSKENAGLLKPASQFVKREPSLEKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDNIDLFNSSGTNDKNGQENREDLDSRGSGTKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMDSFMGKLQFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHPSNGVMPQSSINHHGLQLQLQHQQQQQQIQQNGNATTKPESNQ | 677 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4921570 | 4924591 | - | CrPI670011_02g008140.1 | Cre02g0814 | 490095 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0814 | 677 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 531 | 594 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 194 | 226 | - | - | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 468 | 491 | - | - | |
Cre02g0814 | 677 | SMART | brlzneu | 529 | 593 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 649 | 677 | - | - | |
Cre02g0814 | 677 | Pfam | bZIP transcription factor | 533 | 587 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0814 | 677 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 267 | 666 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 378 | 454 | - | - | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 400 | 431 | - | - | |
Cre02g0814 | 677 | Coils | Coil | 612 | 632 | - | - | |
Cre02g0814 | 677 | Coils | Coil | 549 | 604 | - | - | |
Cre02g0814 | 677 | FunFam | probable transcription factor PosF21 | 532 | 585 | - | - | |
Cre02g0814 | 677 | SUPERFAMILY | Leucine zipper domain | 533 | 584 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 170 | 361 | - | - | |
Cre02g0814 | 677 | CDD | bZIP_plant_RF2 | 534 | 583 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 292 | 327 | - | - | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 179 | 193 | - | - | |
Cre02g0814 | 677 | MobiDBLite | consensus disorder prediction | 339 | 361 | - | - | |
Cre02g0814 | 677 | Gene3D | - | 532 | 584 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0814 | Cre-Chr2:4921570 | Cre08g0642 | Cre-Chr8:19356321 | 4.40E-41 | dispersed | |
Cre02g0814 | Cre-Chr2:4921570 | Cre02g0815 | Cre-Chr2:4933479 | 4.60E-272 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53107 | PF00170 | bZIP_1 | 1.10E-08 | CL0018 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0814 | - | - | - | 0.0 |