Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0814 ATGAAAATCGGTGTACAAGTAGTCATCGTCATCGTCGTCGTGAGTGAGAAGAGAGAGAGAGAGAGAGAGAAAGTGCCGACGCGATTTTTAGAGAGAGAAATCGCCGGCGTCCTCGTGATTCCCGCCGGCGGATTGCTTTATATAACCTCACTGCTAATTCTGGACGGAAATGCTTCTCTCAATGGCGGAGAATTAAGGGTTTTTTCCTCTTCAGACTCTTCCGCCGTCGTCGGAGGGAGGTGGCTAACTTTCCGGCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATTACTTCCGATGAGATTGTGAGGTGGAGTGGCGTAGGCGAAATGGGTGATACTGAAGATGCTAACACTGAGAACATGCGAAATCTTCAATGTTCGTATGGAGTATCTTCTTCTTCAGCTGGAAATCTTCCTTTCTCGATGGATCAACTTAAAATTTCCCAAATGAACTGCTCACAAATCCGTCCACCGCACTTTCAGTCAAATTTTCTTGCGGATAATAGTAGAAGAATTGGGATACCTCCTAGCCCCAACTCACCGCAGATCCCACCAATTTCACCGTATTCTCAGATCCCGATCTCGCGTCCGATGAATCAGCAAAATTATAACCCGGTGCCTACTCATTCCCGATCGTTGTCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGCCCATCTCCATTTCGTGAATCCCCAACTACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATAACAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGAGGGCCAATTCTTCTAAGATGGGAGATTCTTTACCTCCTCGTAAAGCACATAGGCGGTCTAGTAGTGATATTCCATTTGGATTATCTTCAATGATTCAGCCATCTCCTCTTCTCCCATTCAATAGCTCTGGTGGATTGGAACGATCAACTAGTAGTAAAGAGAATGCTGGCTTACTAAAGCCCGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTGGAGAAAAGCGTTGACAACAATTTAGAAGGAATGGGTGAGAGGAAATCTGATGGGGACAGCGTGGACGACTTGTTTTCTGCTTATATGAATTTGGATAATATCGATTTGTTCAACTCTTCTGGGACTAACGACAAGAATGGTCAAGAGAATCGAGAGGATTTGGATAGTAGGGGTAGTGGAACAAAGACAAATGGGGGTGAGAGCAGTGATAATGAAGCAGAAAGCAGTGTAAATGAAAGCGGGGATAGCGCTCAAATGCCTGGATTGAATTCATCTGCTGAGAAGAGGGAAGGGATCAAACGGACCGCAGGGGGAGATATTGCTCCAACTACCAGACATTACCGAAGTGTCTCCATGGATAGTTTCATGGGCAAGTTGCAGTTTGGTGATGAGTCTCCCAAAATGCCTCCCACACCACCTGGCGTTCGCCCGGGGCAACTTTCTTCAAACAACTTAGTTGATGGTAATTCTGCTCCATTCAGTTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCCGAGATTGCTTTGACTGATCCCAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCGAAAGAGCGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCCGCTCAACTCACACTTCTACAGAGAGATTCCGTGGGCCTTACAAACCAGAATAATGAACTGAAGTTTCGTCTACAAGCCATGGAACAACAAGCACAACTACGGGATGCACTTAACGAAGCCTTAACCGCGGAGGTTCAGAGATTGAAACTCGCTACAACAGAGCTAAATGCGCAGTCTCATCCCTCCAACGGAGTAATGCCCCAATCTTCCATCAATCACCATGGCCTCCAGCTTCAGCTTCAGCACCAGCAACAACAACAACAGATCCAGCAGAATGGGAATGCAACCACAAAACCAGAATCCAACCAATAA 2034 46.17 MKIGVQVVIVIVVVSEKREREREKVPTRFLEREIAGVLVIPAGGLLYITSLLILDGNASLNGGELRVFSSSDSSAVVGGRWLTFRRGHCRASGRLGVITSDEIVRWSGVGEMGDTEDANTENMRNLQCSYGVSSSSAGNLPFSMDQLKISQMNCSQIRPPHFQSNFLADNSRRIGIPPSPNSPQIPPISPYSQIPISRPMNQQNYNPVPTHSRSLSQPSFFSLDSLPPLSPSPFRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRANSSKMGDSLPPRKAHRRSSSDIPFGLSSMIQPSPLLPFNSSGGLERSTSSKENAGLLKPASQFVKREPSLEKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDNIDLFNSSGTNDKNGQENREDLDSRGSGTKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMDSFMGKLQFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHPSNGVMPQSSINHHGLQLQLQHQQQQQQIQQNGNATTKPESNQ 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4921570 4924591 - CrPI670011_02g008140.1 Cre02g0814 490095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0814 677 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 531 594 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre02g0814 677 MobiDBLite consensus disorder prediction 194 226 - -
Cre02g0814 677 MobiDBLite consensus disorder prediction 468 491 - -
Cre02g0814 677 SMART brlzneu 529 593 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre02g0814 677 MobiDBLite consensus disorder prediction 649 677 - -
Cre02g0814 677 Pfam bZIP transcription factor 533 587 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre02g0814 677 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 267 666 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cre02g0814 677 MobiDBLite consensus disorder prediction 378 454 - -
Cre02g0814 677 MobiDBLite consensus disorder prediction 400 431 - -
Cre02g0814 677 Coils Coil 612 632 - -
Cre02g0814 677 Coils Coil 549 604 - -
Cre02g0814 677 FunFam probable transcription factor PosF21 532 585 - -
Cre02g0814 677 SUPERFAMILY Leucine zipper domain 533 584 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre02g0814 677 MobiDBLite consensus disorder prediction 170 361 - -
Cre02g0814 677 CDD bZIP_plant_RF2 534 583 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cre02g0814 677 MobiDBLite consensus disorder prediction 292 327 - -
Cre02g0814 677 MobiDBLite consensus disorder prediction 179 193 - -
Cre02g0814 677 MobiDBLite consensus disorder prediction 339 361 - -
Cre02g0814 677 Gene3D - 532 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0814 Cre-Chr2:4921570 Cre08g0642 Cre-Chr8:19356321 4.40E-41 dispersed
Cre02g0814 Cre-Chr2:4921570 Cre02g0815 Cre-Chr2:4933479 4.60E-272 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53107 PF00170 bZIP_1 1.10E-08 CL0018 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0814 - - - 0.0