Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0815 | ATGGGTGATACTGAAGATGCTCGTACTGATAACCTACGAAATCTTCAATGTTCGTTTGGAACATCTTCCTCTTCTGCTTTAAAGCATCATTTCTCTATGGATCAACTTAAAATTTCTCAAATGAACTGCTCACAAGGCCGCGCACAGCATTTTCATTCGAATTTTCTTGGAGATAATAGTAGAAGAATTGGGATACCTCCTTGTCCCAACTCACCGCAGATCCCACCAATCTCACCGTATTCCCAGATCCCGGTGTCGCGTCCGATGAACCAGCAGAGTTATAACTCAGTTCCTACTCATTCTCGATCGTTATCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGTCCGTCTCCGTTTCGTGACTCCCCTTCTACATCGAATTCAGATCAGGTTTCTGCTGATACGTCAATGGAGGATAGAGATGCCAGTTCACATTCTTTGTTGCCTCCCTCACCTTATACGAGAGCCAATTCTTCGAAGATGGGTGATGCTTTACCTCCTCGTAAAGCCCATAGGCGTTCTAACAGTGATATTCCATTTGGATTATCTTCGATGATTCAGTCATCTCCTCTTCTCCCTTTTAGTGGTTCAGGTGGATTGGAGCGATCAACTAGTAGTAAAGAGAATGCGGGAATATTTAAGCCGGCCAGCCAGTTTGTTAAAAGAGAGCCTAGTTTGGAGAAAAGCATTGATAACAATTTGGAAGGAATGGGTGAAAAGAAGTCGGAAGGGGACACTGTGGATGATTTATTCTCTGCTTATATGAATTTGGATAATATTGATTTGTTCAACTCCTCAGGGACCAACGACAAGAATGGTCATGAGAATCGGGAGGATTTGGATAGTAGAGGTAGCGGAACAAAAACAGGGGGTGAGAGCAGCGATAATGAAGCAGAAAGCAGTGTGAACGAAAGTGGGGATAACTCTCAAGTGCCTGGATTGAATTCGTCTGCTGAGAAGAGGGAAGGGATTAAACGGACTGCAGGGGGAGATATTGCTCCAAATAACAGACATTACCGGAGTATCTCCATGGATAGTTTTATGGGCAAGTTACAGTTTGGTGATGAGTCACCGAAAATGCCTCCTACGCCGCCCGGCATTCGTCCAGGGCAACTTTCTTCAAACAACCTAGCTGACGGTAATTCGACTCCATTCAGCTTGGAGTTCGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCGGAGATTGCACTAACCGATCCCAAGCGTGCAAAGAGGATTTTGGCTAACCGTCAATCTGCTGCTCGATCAAAAGAACGGAAAATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACGCTGTCTGCCCAACTCACGCTTCTGCAGCGAGACTCTGTTGGACTTACAAACCAGAATAATGAACTTAAGTTCCGTCTCCAAGCCATGGAACAGCAAGCACAACTACGGGATGCTCTAAATGAAGCATTAACCGCGGAGGTTCAGAGATTGAAGCTCGCTACAACCAATATAAACGCGCAATCTCATCCCTCAGACGGGGTAATGGCTCAATCTTCTATGAATCACCACGGACTCCAACTTCAGCTTCAGCAGCAGCAACAACATCACCAACAACAGCAACATATGCAGCAGAATGGCAGTGCAACCACAAAACCAGAGTCCAACCAATAA | 1710 | 45.09 | MGDTEDARTDNLRNLQCSFGTSSSSALKHHFSMDQLKISQMNCSQGRAQHFHSNFLGDNSRRIGIPPCPNSPQIPPISPYSQIPVSRPMNQQSYNSVPTHSRSLSQPSFFSLDSLPPLSPSPFRDSPSTSNSDQVSADTSMEDRDASSHSLLPPSPYTRANSSKMGDALPPRKAHRRSNSDIPFGLSSMIQSSPLLPFSGSGGLERSTSSKENAGIFKPASQFVKREPSLEKSIDNNLEGMGEKKSEGDTVDDLFSAYMNLDNIDLFNSSGTNDKNGHENREDLDSRGSGTKTGGESSDNEAESSVNESGDNSQVPGLNSSAEKREGIKRTAGGDIAPNNRHYRSISMDSFMGKLQFGDESPKMPPTPPGIRPGQLSSNNLADGNSTPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTNINAQSHPSDGVMAQSSMNHHGLQLQLQQQQQHHQQQQHMQQNGSATTKPESNQ | 569 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4933479 | 4937259 | - | CrPI670011_02g008150.1 | Cre02g0815 | 490096 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0815 | 569 | SMART | brlzneu | 417 | 481 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0815 | 569 | Coils | Coil | 437 | 492 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 57 | 249 | - | - | |
Cre02g0815 | 569 | CDD | bZIP_plant_RF2 | 422 | 471 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0815 | 569 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 156 | 557 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 228 | 249 | - | - | |
Cre02g0815 | 569 | SUPERFAMILY | Leucine zipper domain | 421 | 472 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 355 | 388 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 290 | 320 | - | - | |
Cre02g0815 | 569 | FunFam | probable transcription factor PosF21 | 420 | 473 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 83 | 115 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 268 | 342 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 516 | 569 | - | - | |
Cre02g0815 | 569 | Gene3D | - | 420 | 472 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 373 | 388 | - | - | |
Cre02g0815 | 569 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 419 | 482 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 181 | 216 | - | - | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 275 | 289 | - | - | |
Cre02g0815 | 569 | Pfam | bZIP transcription factor | 421 | 475 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cre02g0815 | 569 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0815 | Cre-Chr2:4933479 | Cre08g0642 | Cre-Chr8:19356321 | 1.80E-40 | dispersed | |
Cre02g0814 | Cre-Chr2:4921570 | Cre02g0815 | Cre-Chr2:4933479 | 4.60E-272 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53108 | PF00170 | bZIP_1 | 1.00E-08 | CL0018 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0815 | - | - | - | 0.0 |