Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g0830 | ATGGAGTTTCTAAACCCTTTTTCTGGGTTCTTCTTCTTCTTCTTCTTTTCTCTTCTTCTCTTTGTCGCTCTTTTGCGAAATTTACATCGTAAATTTCGCTACCCGCCTGGCCCCGGTGGATTGCCCATCATCGGCAACATGCTGATGATGGACCAACTCACCCACCGTGGCCTCGCCCGTCTCGCCGCCATCTACGGTGGCCTCTTCCACCTCCGACTCGGGGTCCTCCACATGGTGGTTGTCTCCACGCCAGATATGGCACGAGAATTCCTCCAAGTTCAAGACGTAGCCTTCGCAAATAGGCCTGCAAACGTTGCGATCACATATCTCACCTACGATCGCGCCGATATGGCCTTTGCCAACTACGGCCCATTTTGGCGCCAAATGCGAAAGATTTGCGTCATCAAGCTCTTCAGCCGCCGACGCGCAGAGTCATGGGCGTCGGTGCGTGACGAAATCGACGCCCTAGTCGGAATGGTTTCAAGTAAAATGGGGCAACCGGTGAATATCGGTGACCTAGTTTTCAGCCTGACACGAAACATAACCTACAAGGCCGCGTTTGGATCGAGGTCGCACCAAGGACAAGATGAGTTCGTTAACATCTTGCAAGAATTCTCTAAACTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGATTTCAATGAAAGAATGGCAAAAGCTAGAAGAGATCTTGATGTGTTCATAAATACCATAATTGATGAACATTTACAAAAGAAAAGGAAGAAAAAGGGAAAAAATGAAGATGATGAAGAAGAAGATTCAGATATGGTTGATGAATTAATGGCATTCCTTGCTGATGAGTCAAGTAACAATGAGTTTGATGATTCACAATCAATTCTTAAGCTCACTACAGACAATATCAAAGCCATAATCATGGATGTAATGTTCGGTGGAACGGAAACAGTAGCTTCAGTGATAGAATGGGCAATGGCGGAGTTAATGAAAAATCCCGAAGAGCTCAATAAGGTCCAACAAGAACTCACACTGACTGTTGGATTAGATCGGACAGTCCACGAATCGGACCTCCAAAATCTCCCCTACTTAAAATTTGCCATCAAAGAAACCCTCCGCCTTCATCCGCCAATTCCACTGCTCCTCCACGAGACTGCTGTTGACACCTCCGTCGCCGGCTACTTCATTCCAACCGGTTCAAGAGTCTGGATCAACGCTTGGGCAATCGGTCGAGACCGAACCGCTTGGGAAGAACCGGACCGTTTCTGGCCAGGGAGGTTTCAAAACGATGTTACTCCAGATTTCAAAGGGAGCAATTTCGAGTTCATCCCCTTCGGGTCGGGTCGGCGATCTTGTCCAGGCATGCAACTTGGACTTTATGCTTGTGAGATGGCGGTTGCAAATCTTGTTCATTGCTTTTCGTGGAAATTGCCGGACGGAATGAATGCCAATGAGCTCGATATGAATGACTCGTTCGGACTCACTGCTCCAAGAGCGATTCGACTCGTAGCCGTACCGAGTTTTCGACTTAACTCGCCTGAGTTTGAACTCGAAGGGAAGAGACGGGAAGATGTATGA | 1578 | 47.4 | MEFLNPFSGFFFFFFFSLLLFVALLRNLHRKFRYPPGPGGLPIIGNMLMMDQLTHRGLARLAAIYGGLFHLRLGVLHMVVVSTPDMAREFLQVQDVAFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRRAESWASVRDEIDALVGMVSSKMGQPVNIGDLVFSLTRNITYKAAFGSRSHQGQDEFVNILQEFSKLFGAFNIADFLPWLGWIHARDFNERMAKARRDLDVFINTIIDEHLQKKRKKKGKNEDDEEEDSDMVDELMAFLADESSNNEFDDSQSILKLTTDNIKAIIMDVMFGGTETVASVIEWAMAELMKNPEELNKVQQELTLTVGLDRTVHESDLQNLPYLKFAIKETLRLHPPIPLLLHETAVDTSVAGYFIPTGSRVWINAWAIGRDRTAWEEPDRFWPGRFQNDVTPDFKGSNFEFIPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWKLPDGMNANELDMNDSFGLTAPRAIRLVAVPSFRLNSPEFELEGKRREDV | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 5083662 | 5086732 | - | CrPI670011_02g008300.1 | Cre02g0830 | 490111 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g0830 | 525 | Gene3D | Cytochrome P450 | 28 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre02g0830 | 525 | SUPERFAMILY | Cytochrome P450 | 35 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | CDD | CYP71-like | 65 | 502 | - | - | |
| Cre02g0830 | 525 | PANTHER | CYTOCHROME P450 84A1-RELATED | 12 | 513 | IPR053062 | GO:0004497(PANTHER) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | FunFam | Cytochrome P450 84A1 | 27 | 508 | - | - | |
| Cre02g0830 | 525 | Coils | Coil | 248 | 268 | - | - | |
| Cre02g0830 | 525 | Pfam | Cytochrome P450 | 35 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre02g0830 | 525 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g0830 | Cre-Chr2:5083662 | Cre07g1255 | Cre-Chr7:26308016 | 1.50E-177 | dispersed | |
| Cre02g0830 | Cre-Chr2:5083662 | Cre04g1623 | Cre-Chr4:34649634 | 3.40E-190 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g0830 | K09755 | - | csv:101217850 | 892.493 |