Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0952 ATGGAAGCTCTCTCTGTTACTCTTTACATAATAATATTCCTTTTTCTTTTTGCTTTCTTTTCCATTTCATTTCTTAAAAGAAATGGAAAGCCTAAATCCCAAAAAGCTCTTAGACTTCCTCCTGGTTCCATGGGATTGCCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGACCCTAATATCTTTTTCTCACAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAACATTTTGGGATATCCTTGTGTGATGTTGGCAAGCGCCGCCGCAGCACGGTTCGTTCTGGTGACAAACGCCCATTTATTCCGGCCGACTTACCCGAAAAGCAAAGAGACGATGATCGGACCGGCGGCGCTTTTCTTCCACCAAGGAAATTACCATTCTAACCTCAGGAAACTTGTTCAAAATTCTTTATCTCTTGAACGACTCAGAATTCTTGTTCCTTATATTGAAGCCGCCGCCATTTCCGCCACCGATTCCTGGGCCGCCGCCGGCCACGTCATCAACACCTTCCTCGAAATGAAAAAGTTTTCTTTTGAGGTGGGAATTGTAGCAGTGTTTGGTAAGCTAGAAAATGAGTACAAAGAGAAGCTAAAAGAAAAGTATTGCATATTAGACAAAGGCTACAATTGTTTTCCAACCAAATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTGAGAGAGATTCTGGGAGAGATAATTATGGAGAGAAGAGAAAAAAGAGTAACAGAGAAAGATTTAGTGGGTCATCTTTTAAACTTCAGAGATGAAAATGGAGAATGTTTAAGTGAAGATCAAATCGCCGACAACATCATCGGAGTTCTCTTCGCCGCCCAAGACACCACCGCCACTGTCCTCACTTGGATTCTTAAATATCTTCATGACAACTTGAAGCTCTTTGAAGCCGTCAAGGCAGAGCAGATGGAAATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAAATTAAAGACATGCCCTTTACTCATAGGGTGGTATTAGAGAGCTTGAGAATGGCTAGCATCATATCTTTCACTTTTAGGGAGGCAGTTGTTGATGTGGAATATAAAGGGTATCTTATCCCAAAGGGTTGGAAGGTGATGCCCTTATTTAGGAATATTCATCACAACCATGAGTACTTCCCTGATCCTCATATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGACCCAATACATTCATGCCATTTGGCAATGGAGTACATTCTTGCCCTGGCAATGAACTTGCCAAGCTGGAAATCCTCATCTTGCTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGTGGGGTTGAATATGGGCCATTCCCAATGCCTGTGAAGATCCTAGAAGCTATGGTGATTTGCTTTGGGCTTGAGACTTTGTCTTCTATTAGTGTGTCGAATATTTTGGTGGAGTCGGATTACTTGGAGGTTATCAATCTGCTGAATGATGTAGCTGATTTTTTTACTAAGGAGGCAAAGAATAGAGGAGGGAAGTTGGGAGTTGTCTCATTTTCTCATGTTCGACATAATCAGAATGTGCTGGCTCATTGGAGGTCGGGTGTCTTCAATTCTTACTTCTCCTTACCCTGA 1641 41.74 MEALSVTLYIIIFLFLFAFFSISFLKRNGKPKSQKALRLPPGSMGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGYPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVQNSLSLERLRILVPYIEAAAISATDSWAAAGHVINTFLEMKKFSFEVGIVAVFGKLENEYKEKLKEKYCILDKGYNCFPTKLPGTAYSKALSARKKLREILGEIIMERREKRVTEKDLVGHLLNFRDENGECLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNLKLFEAVKAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVEYGPFPMPVKILEAMVICFGLETLSSISVSNILVESDYLEVINLLNDVADFFTKEAKNRGGKLGVVSFSHVRHNQNVLAHWRSGVFNSYFSLP 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6742332 6748261 - CrPI670011_02g009520.1 Cre02g0952 490233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0952 546 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 Gene3D Cytochrome P450 28 469 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 PANTHER CYTOCHROME P450 26 38 453 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cre02g0952 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre02g0952 546 FunFam Abscisic acid 8 29 471 - -
Cre02g0952 546 Pfam Cytochrome P450 40 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre02g0952 546 CDD CYP90-like 68 463 - -
Cre02g0952 546 SUPERFAMILY Cytochrome P450 34 451 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0952 Cre-Chr2:6742332 Cre07g1471 Cre-Chr7:29938299 1.00E-152 dispersed
Cre07g0960 Cre-Chr7:10694282 Cre02g0952 Cre-Chr2:6742332 7.40E-12 transposed
Cre08g0250 Cre-Chr8:6411128 Cre02g0952 Cre-Chr2:6742332 6.60E-12 transposed
Cre10g0606 Cre-Chr10:5577521 Cre02g0952 Cre-Chr2:6742332 6.40E-15 transposed
Cre02g0952 Cre-Chr2:6742332 Cre05g2177 Cre-Chr5:33509965 9.30E-183 wgd
Cre02g0952 Cre-Chr2:6742332 Cre08g1540 Cre-Chr8:28014050 1.60E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0952 K09843 - csv:101219389 846.269