Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0953 | ATGGCTTCCACGACAAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCACCAAGAAGTCGGCCACAAGAGCCTGTTGCAAAGCGATGCTCTGTATCAGTACATTCTGGAGACGAGCGTTTATCCACGGGAGCCTGAATCGATGAAGGAATTAAGAGAATTGACAGCGAAACATCCATGGAATATAATGACGACATCGGCGGATGAAGGACAGTTCTTAAACATGTTATTGAAGCTAATTAATGCGAAGAAAACGATGGAGATTGGAGTTTATACTGGCTACTCGCTTCTGGCTACAGCCCTAGCTCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTGGGTTTGCCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAGAATCATGGAAGCTTTGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATTGATTTGGTCAAAGTTGGGGGAGTGATCGGGTACGACAACACTCTATGGAACGGGTCAGTGGTTGCCCCACCTGACGCACCCATGCGCAAGTATGTTAGGTATTATCGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCAATTGACCCTAGGATCGAGATTTGTATGCTTCCCGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTAA | 750 | 46.27 | MASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAIDPRIEICMLPVGDGITLCRRIN | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6791640 | 6793483 | - | CrPI670011_02g009530.1 | Cre02g0953 | 490234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0953 | 249 | CDD | AdoMet_MTases | 87 | 188 | - | - | |
Cre02g0953 | 249 | Gene3D | Vaccinia Virus protein VP39 | 23 | 249 | IPR029063 | - | |
Cre02g0953 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cre02g0953 | 249 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 17 | 249 | - | - | |
Cre02g0953 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171(InterPro) | |
Cre02g0953 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171(InterPro) | |
Cre02g0953 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - | |
Cre02g0953 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 21 | 248 | IPR050362 | GO:0008757(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0953 | Cre-Chr2:6791640 | Cre11g1802 | Cre-Chr11:29603335 | 6.10E-65 | dispersed | |
Cre02g0953 | Cre-Chr2:6791640 | Cre04g1319 | Cre-Chr4:31977521 | 3.00E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0953 | K00588 | - | csv:101205648 | 497.278 |