Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0953 ATGGCTTCCACGACAAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCACCAAGAAGTCGGCCACAAGAGCCTGTTGCAAAGCGATGCTCTGTATCAGTACATTCTGGAGACGAGCGTTTATCCACGGGAGCCTGAATCGATGAAGGAATTAAGAGAATTGACAGCGAAACATCCATGGAATATAATGACGACATCGGCGGATGAAGGACAGTTCTTAAACATGTTATTGAAGCTAATTAATGCGAAGAAAACGATGGAGATTGGAGTTTATACTGGCTACTCGCTTCTGGCTACAGCCCTAGCTCTTCCCGAAGATGGAACGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTGGGTTTGCCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAGAATCATGGAAGCTTTGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATTGATTTGGTCAAAGTTGGGGGAGTGATCGGGTACGACAACACTCTATGGAACGGGTCAGTGGTTGCCCCACCTGACGCACCCATGCGCAAGTATGTTAGGTATTATCGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCAATTGACCCTAGGATCGAGATTTGTATGCTTCCCGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTAA 750 46.27 MASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAIDPRIEICMLPVGDGITLCRRIN 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6791640 6793483 - CrPI670011_02g009530.1 Cre02g0953 490234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0953 249 CDD AdoMet_MTases 87 188 - -
Cre02g0953 249 Gene3D Vaccinia Virus protein VP39 23 249 IPR029063 -
Cre02g0953 249 MobiDBLite consensus disorder prediction 1 20 - -
Cre02g0953 249 FunFam Caffeoyl-CoA O-methyltransferase 1 17 249 - -
Cre02g0953 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171(InterPro)
Cre02g0953 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171(InterPro)
Cre02g0953 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Cre02g0953 249 PANTHER O-METHYLTRANSFERASE-RELATED 21 248 IPR050362 GO:0008757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0953 Cre-Chr2:6791640 Cre11g1802 Cre-Chr11:29603335 6.10E-65 dispersed
Cre02g0953 Cre-Chr2:6791640 Cre04g1319 Cre-Chr4:31977521 3.00E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0953 K00588 - csv:101205648 497.278