Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g0980 ATGACCCTTTCACCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCTCCGCTCCAGCTCCCTCTCTCTGTTCCTTCCTCCCACCTTCGAAACCCTAAATCCACATCTCTCCTTGAAAATTTCGCACCCTTTTGTCGCCTTGGATTGTTCGGCTATCGTTGTTTTTTTTCTGGTCATATAATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCAATTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTCCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGACCTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGGAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCAGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAAGAAGAGAGATGCAAAGTTGAAAAGTTCGTGGAATGGCAGACGCGGCATCGGCAATATAATTGCGAAAGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTTTACTCCCAACCATTTCTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTGAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTAGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATATTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCATATGCTACAATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCCGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA 2910 44.19 MTLSPIPSKPRRFSVSPLQLPLSVPSSHLRNPKSTSLLENFAPFCRLGLFGYRCFFSGHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGPNDRDDVFSDSESEGGSSKSKEEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYEKKRDAKLKSSWNGRRGIGNIIAKEKFLGIQFLRPLLPTISQFLFCGLCSKYSILVGSLQKRGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFHAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPPPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7185701 7197818 + CrPI670011_02g009800.1 Cre02g0980 490261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g0980 969 MobiDBLite consensus disorder prediction 517 550 - -
Cre02g0980 969 ProSiteProfiles C2 domain profile. 720 834 IPR000008 -
Cre02g0980 969 MobiDBLite consensus disorder prediction 574 614 - -
Cre02g0980 969 MobiDBLite consensus disorder prediction 514 650 - -
Cre02g0980 969 Pfam PTEN2, C2 domain 392 518 - -
Cre02g0980 969 ProSiteProfiles C2 tensin-type domain profile. 391 518 IPR014020 -
Cre02g0980 969 MobiDBLite consensus disorder prediction 932 969 - -
Cre02g0980 969 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 190 387 - -
Cre02g0980 969 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 218 386 IPR029021 -
Cre02g0980 969 Gene3D C2 domain 734 854 IPR035892 -
Cre02g0980 969 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 192 607 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Cre02g0980 969 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 735 854 IPR035892 -
Cre02g0980 969 Pfam C2 domain 736 831 IPR000008 -
Cre02g0980 969 CDD PTP_PTEN 215 380 IPR045101 GO:0016791(InterPro)
Cre02g0980 969 MobiDBLite consensus disorder prediction 551 573 - -
Cre02g0980 969 ProSitePatterns Tyrosine specific protein phosphatases active site. 321 331 IPR016130 GO:0016311(InterPro)
Cre02g0980 969 MobiDBLite consensus disorder prediction 65 110 - -
Cre02g0980 969 SMART PTEN_C2_2 389 517 IPR014020 -
Cre02g0980 969 CDD C2 736 833 - -
Cre02g0980 969 MobiDBLite consensus disorder prediction 152 172 - -
Cre02g0980 969 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 319 358 IPR000387 GO:0016311(InterPro)
Cre02g0980 969 Gene3D Protein tyrosine phosphatase superfamily 190 387 IPR029021 -
Cre02g0980 969 ProSiteProfiles Phosphatase tensin-type domain profile. 205 384 IPR029023 -
Cre02g0980 969 SMART C2_3c 735 832 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1677 Cre-Chr10:30991356 Cre02g0980 Cre-Chr2:7185701 9.70E-41 transposed
Cre02g0980 Cre-Chr2:7185701 Cre04g1330 Cre-Chr4:32115620 1.40E-202 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g0980 K01110 - csv:101222304 1125.92