Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g0980 | ATGACCCTTTCACCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCTCCGCTCCAGCTCCCTCTCTCTGTTCCTTCCTCCCACCTTCGAAACCCTAAATCCACATCTCTCCTTGAAAATTTCGCACCCTTTTGTCGCCTTGGATTGTTCGGCTATCGTTGTTTTTTTTCTGGTCATATAATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCAATTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTCCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGACCTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGGAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCAGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAAGAAGAGAGATGCAAAGTTGAAAAGTTCGTGGAATGGCAGACGCGGCATCGGCAATATAATTGCGAAAGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTTTACTCCCAACCATTTCTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTGAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTAGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATATTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCATATGCTACAATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCCGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA | 2910 | 44.19 | MTLSPIPSKPRRFSVSPLQLPLSVPSSHLRNPKSTSLLENFAPFCRLGLFGYRCFFSGHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPIQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGPNDRDDVFSDSESEGGSSKSKEEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYEKKRDAKLKSSWNGRRGIGNIIAKEKFLGIQFLRPLLPTISQFLFCGLCSKYSILVGSLQKRGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFHAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPPPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY | 969 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7185701 | 7197818 | + | CrPI670011_02g009800.1 | Cre02g0980 | 490261 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 517 | 550 | - | - | |
Cre02g0980 | 969 | ProSiteProfiles | C2 domain profile. | 720 | 834 | IPR000008 | - | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 574 | 614 | - | - | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 514 | 650 | - | - | |
Cre02g0980 | 969 | Pfam | PTEN2, C2 domain | 392 | 518 | - | - | |
Cre02g0980 | 969 | ProSiteProfiles | C2 tensin-type domain profile. | 391 | 518 | IPR014020 | - | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 932 | 969 | - | - | |
Cre02g0980 | 969 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 190 | 387 | - | - | |
Cre02g0980 | 969 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 218 | 386 | IPR029021 | - | |
Cre02g0980 | 969 | Gene3D | C2 domain | 734 | 854 | IPR035892 | - | |
Cre02g0980 | 969 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 192 | 607 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Cre02g0980 | 969 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 735 | 854 | IPR035892 | - | |
Cre02g0980 | 969 | Pfam | C2 domain | 736 | 831 | IPR000008 | - | |
Cre02g0980 | 969 | CDD | PTP_PTEN | 215 | 380 | IPR045101 | GO:0016791(InterPro) | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 551 | 573 | - | - | |
Cre02g0980 | 969 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 321 | 331 | IPR016130 | GO:0016311(InterPro) | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 65 | 110 | - | - | |
Cre02g0980 | 969 | SMART | PTEN_C2_2 | 389 | 517 | IPR014020 | - | |
Cre02g0980 | 969 | CDD | C2 | 736 | 833 | - | - | |
Cre02g0980 | 969 | MobiDBLite | consensus disorder prediction | 152 | 172 | - | - | |
Cre02g0980 | 969 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 319 | 358 | IPR000387 | GO:0016311(InterPro) | |
Cre02g0980 | 969 | Gene3D | Protein tyrosine phosphatase superfamily | 190 | 387 | IPR029021 | - | |
Cre02g0980 | 969 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 205 | 384 | IPR029023 | - | |
Cre02g0980 | 969 | SMART | C2_3c | 735 | 832 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g1677 | Cre-Chr10:30991356 | Cre02g0980 | Cre-Chr2:7185701 | 9.70E-41 | transposed | |
Cre02g0980 | Cre-Chr2:7185701 | Cre04g1330 | Cre-Chr4:32115620 | 1.40E-202 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g0980 | K01110 | - | csv:101222304 | 1125.92 |